CX307844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.524e-37 Identity = 62/113 (54.87%), Postives = 76/113 (67.26%), Query Frame = 2 Query: 11 TIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349 TIITG+ + + T+ +ATVA G GF+ D+ F+NTAGP+K AVALRV D+S Y C + YQD LY HS+RQF+ C I GTVDFI GNA AV Q C I AR+P GQ Sbjct: 249 TIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQ 361 HSP 2 Score: 50.8322 bits (120), Expect = 4.524e-37 Identity = 25/62 (40.32%), Postives = 36/62 (58.06%), Query Frame = 1 Query: 352 NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 N++TAQ R + +G IQ I +SDL + TYLGRPW+ +S ++QS I DL+ Sbjct: 363 NVITAQSRATKDVKSGFSIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFIGDLV 422
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 6.913e-37 Identity = 76/138 (55.07%), Postives = 95/138 (68.84%), Query Frame = 2 Query: 11 TIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARK--PNSGQKIWSQPKAGLTLTKTPALSFKNL 418 T+I+G+R+ +DG TTF+SAT AV G GFLARDITFQNTAGP KHQAVALR +DLS F+ C M YQDTLY H+ RQF+ C I GTVDFIFG+ V QNC I A++ PN I +Q + + ++ F N+ Sbjct: 273 TVISGNRSFIDGWTTFRSATFAVSGRGFLARDITFQNTAGPEKHQAVALRSDSDLSVFFRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNI 410
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.451e-35 Identity = 76/139 (54.68%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 11 TIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKIWSQPKAGLTLTKTPALSFKNLGLV 427 T ITG+R+V DG TTF+SAT+AV GEGFLARDI NTAGP KHQAVALRV AD A Y C + YQDTLY HS RQF+ C I GT+D+IFGNAA V Q C+I ++ P GQ ++ T + +S +N ++ Sbjct: 298 TFITGNRSVGDGWTTFRSATLAVSGEGFLARDIMITNTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSIL 436
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.515e-34 Identity = 60/116 (51.72%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 8 RTIITGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349 +T+I+ +R+V G+TT SATV V EGF+A+ + F+NTAGP HQA A+RV D + +NC YQDTLYV++ RQF+ NC+++GTVDFIFG +A V+QN I RK + GQ Sbjct: 336 KTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQ 451 HSP 2 Score: 47.3654 bits (111), Expect = 1.515e-34 Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 1 Query: 352 NMVTAQGRT-DPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 N VTA G GIV+Q RI L + + TYLGRPWK++S TVIM + + DLI Sbjct: 453 NTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLI 515
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.154e-34 Identity = 74/146 (50.68%), Postives = 96/146 (65.75%), Query Frame = 2 Query: 2 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARK--PNSGQKIWSQPK------AGLTLTKTPALSFKN 415 + +T + GSRN +DG+ TF++AT AV G+GF+A+DI F N AG SKHQAVALR G+D S F+ C +QDTLY HSNRQF+ +C I GT+DFIFGNAA V Q+C I R+ PN I +Q K G+ + K+ F N Sbjct: 331 KDKTFVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTITPFGN 476 HSP 2 Score: 71.2478 bits (173), Expect = 3.455e-12 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 352 NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540 N +TAQG+ DPNQNTGI+IQKS I + + PTYLGRPWK++S TVIMQS I L++ Sbjct: 448 NTITAQGKKDPNQNTGIIIQKSTITPFGN----NLTAPTYLGRPWKDFSTTVIMQSDIGALLN 506
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.395e-34 Identity = 64/117 (54.70%), Postives = 80/117 (68.38%), Query Frame = 2 Query: 5 TRTIITGSRNV--VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349 T+TIIT R+V G+TT S TV V EGF+A+ I FQNTAGP HQAVA RV D + +NC YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN I RK + GQ Sbjct: 331 TQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQ 447 HSP 2 Score: 45.0542 bits (105), Expect = 7.395e-34 Identity = 26/72 (36.11%), Postives = 37/72 (51.39%), Query Frame = 1 Query: 325 CTKAQFRPKNMVTAQGRTDPNQ-NTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 C K N VTA G GIV+ RI A +L+ + + +YLGRPWK ++ T ++ + I DLI Sbjct: 440 CRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLI 511
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 9.629e-34 Identity = 61/116 (52.59%), Postives = 81/116 (69.83%), Query Frame = 2 Query: 8 RTIITGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349 +T+I+ +R+V G+TT S TV V EGF+A+ I F+NTAGP HQAVA+RV D + +NC YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN I RK N GQ Sbjct: 343 KTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQ 458 HSP 2 Score: 45.8246 bits (107), Expect = 9.629e-34 Identity = 30/70 (42.86%), Postives = 37/70 (52.86%), Query Frame = 1 Query: 331 KAQFRPKNMVTAQGRTDP-NQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 K QF N VTA G GIV+Q RI L + +YLGRPWK++S TVI+ S I D+I Sbjct: 456 KGQF---NTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVI 522
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.254e-33 Identity = 64/117 (54.70%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 5 TRTIITGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349 T+TIIT R+V G+TT S TV V EGF+A+ I F+NTAGP HQAVALRV D + +NC YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN I RK + GQ Sbjct: 335 TQTIITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQ 451 HSP 2 Score: 44.2838 bits (103), Expect = 1.254e-33 Identity = 25/63 (39.68%), Postives = 36/63 (57.14%), Query Frame = 1 Query: 352 NMVTAQGRTD-PNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 N VTA G GIV+ RI +L+ + + +YLGRPWK+++ TVI+ + I DLI Sbjct: 453 NYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLI 515
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.594e-33 Identity = 75/142 (52.82%), Postives = 91/142 (64.08%), Query Frame = 2 Query: 11 TIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKIWSQPKAGLTLTKTPALSFKNLGLVPPP 436 TIITG R+V G TT+ SAT + G F+A+ ITF+NTAGP+K QAVALR +DLS FY C + YQDTL VHS RQF+ C I GTVDFIFGNAAAV QNC I R+P GQ + + +S N ++P P Sbjct: 284 TIITGGRSVQGGYTTYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAP 425 HSP 2 Score: 73.1738 bits (178), Expect = 9.092e-13 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 352 NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 N++TAQGR DP QNTGI I SRI DLK V G+ TY+GRPW ++SRTV++Q+ + +++ Sbjct: 398 NVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVV 459
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.082e-33 Identity = 75/142 (52.82%), Postives = 89/142 (62.68%), Query Frame = 2 Query: 11 TIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKIWSQPKAGLTLTKTPALSFKNLGLVPPP 436 TIITG R+V G TT+ SAT + G F+A+ I FQNTAGP+K QAVALR +DLS FY C + YQDTL VHS RQF+ C I GTVDFIFGNAA V QNC I R P GQ + L + +S N ++P P Sbjct: 288 TIITGGRSVKGGYTTYSSATAGIEGLHFIAKGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAP 429 The following BLAST results are available for this feature:
BLAST of CX307844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307844 ID=CX307844; Name=CX307844; organism=Citrus clementina; type=EST; length=541bpback to top |