CX307844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.326e-17 Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = 2 Query: 41 DGSTTFKSATVAVVGEGFLARDITFQNTAG-PSKHQ--------AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI 322 D + +S T + + + + + ITF N+ PSK + AVA +G D SAFY+ QDTL+ R +F C I G VDFIFG ++ Q+C I Sbjct: 100 DHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVI 202 HSP 2 Score: 45.8246 bits (107), Expect = 1.326e-17 Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 1 Query: 358 VTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 +TAQGRT+P G + LV G+ +LGRPW+ YSR + S++TD++ Sbjct: 217 ITAQGRTNPYDANGFIFINC---------LVYGTGMAFLGRPWRGYSRVIFYNSNLTDVV 267
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.659e-17 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 41 DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSG 346 DG +S T+ + F+ R +T QN G + +AVALRV AD +AFY C + +YQDTL + +F NC I G DFI G+A+++ + C +H+ PN+G Sbjct: 119 DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNG 219
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.915e-17 Identity = 38/97 (39.18%), Postives = 57/97 (58.76%), Query Frame = 2 Query: 53 TFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHA 328 T+++A+V V F AR+I+F NTA G QAVA R+ D + F C QDTL + R +F C I G++DFIFGN ++ ++C++H+ Sbjct: 141 TYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS 237 HSP 2 Score: 31.187 bits (69), Expect = 4.915e-17 Identity = 18/50 (36.00%), Postives = 23/50 (46.00%), Query Frame = 1 Query: 358 VTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTV 507 + A GRT P + TG R V G+ P Y+GR +YSR V Sbjct: 245 IAAHGRTCPEEKTGFAFVGCR---------VTGTGPLYVGRAMGQYSRIV 285
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.086e-16 Identity = 42/116 (36.21%), Postives = 56/116 (48.28%), Query Frame = 2 Query: 2 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARD-------ITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHA 328 R TI D S+TF S +V + +T N AVA+ V D SAFYNCD L QDT++ + R F NC I G +DFIFG+ +V ++C I+A Sbjct: 46 RVTTITYNGHAATDVSSTFTSYPSHIVVRNLSIMNTYNRLTSLTKANGMSWDIKPAVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINA 161 HSP 2 Score: 37.3502 bits (85), Expect = 1.086e-16 Identity = 18/61 (29.51%), Postives = 32/61 (52.46%), Query Frame = 1 Query: 358 VTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540 +TAQGR+ + +G V + V GS YLGR + +SR + +Q+ ++ ++H Sbjct: 175 ITAQGRSSDSDPSGFVFLRGS---------VSGSTSVYLGRAYGPFSRVIFIQTDLSSVVH 226
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.829e-16 Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = 2 Query: 41 DGSTTFKSATVAVVGEGFLARDITFQNTAG-PSKHQ--------AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI 322 D ++ +S T A + + + + ITF N+ PS + AVA +G D SAFY+ QDTL+ R +F C I G VDFI G+ ++ Q+C I Sbjct: 95 DHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVI 197 HSP 2 Score: 44.669 bits (104), Expect = 1.829e-16 Identity = 23/60 (38.33%), Postives = 31/60 (51.67%), Query Frame = 1 Query: 358 VTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 +TAQGRT+ N G V LV G YLGR W+ YSR + S++TD++ Sbjct: 212 ITAQGRTNANDANGFVFINC---------LVHGFGKAYLGRAWRPYSRVIFYNSNLTDVV 262
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.082e-16 Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 2 Query: 53 TFKSATVAVVGEGFLARDITFQNTAGP----SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHA 328 T +SAT+ V E F A +T +NTA S+ QA+A+R+ AD +AFY+C +QDTL FF +C I GT DFIFG A++ N +HA Sbjct: 140 TVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA 235 HSP 2 Score: 27.7202 bits (60), Expect = 3.082e-16 Identity = 14/62 (22.58%), Postives = 26/62 (41.94%), Query Frame = 1 Query: 355 MVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540 ++TAQGR + G ++ T YLGR W + + V + +T +++ Sbjct: 242 VITAQGRQSATEQNGYTFVHCKVTGTGT--------GIYLGRSWMSHPKVVYAFTEMTSVVN 295
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.140e-15 Identity = 42/111 (37.84%), Postives = 57/111 (51.35%), Query Frame = 2 Query: 11 TIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHA 328 T I + T S + V F A +I+F+N A G + QAVALR+ D +AFY C QDTL R FF C I G++DFIFGN ++ Q+C I++ Sbjct: 151 TSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINS 261 HSP 2 Score: 27.335 bits (59), Expect = 1.140e-15 Identity = 16/60 (26.67%), Postives = 26/60 (43.33%), Query Frame = 1 Query: 358 VTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 +TAQGR ++ +G +I GS LGR W Y+ V + ++ +I Sbjct: 274 ITAQGRQSEDEQSGFSFVNCKI---------DGSGEILLGRAWGAYATVVFSNTYMSGII 324
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.654e-13 Identity = 45/115 (39.13%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 41 DGST--TFKSATVAVVGEGFLARDITFQNT----AGPSKH----------QAVALRV--GADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR 331 DGS T S+T+ + + F A+ +T +N A +K QAVAL V D + F + ++ YQDTLYV R FF +C I+GTVDFIFG+ A+ NCD+ +R Sbjct: 103 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSR 217 HSP 2 Score: 25.0238 bits (53), Expect = 1.654e-13 Identity = 17/40 (42.50%), Postives = 20/40 (50.00%), Query Frame = 1 Query: 376 TDPNQNTGIVIQKSRIGATSDLKLVQGSFPTY---LGRPW 486 T+ NQ G+VI SR+ SD S P LGRPW Sbjct: 236 TNINQKYGLVITNSRVIRESD------SVPAKSYGLGRPW 269
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.654e-13 Identity = 45/115 (39.13%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 41 DGST--TFKSATVAVVGEGFLARDITFQNT----AGPSKH----------QAVALRV--GADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR 331 DGS T S+T+ + + F A+ +T +N A +K QAVAL V D + F + ++ YQDTLYV R FF +C I+GTVDFIFG+ A+ NCD+ +R Sbjct: 103 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSR 217 HSP 2 Score: 25.0238 bits (53), Expect = 1.654e-13 Identity = 17/40 (42.50%), Postives = 20/40 (50.00%), Query Frame = 1 Query: 376 TDPNQNTGIVIQKSRIGATSDLKLVQGSFPTY---LGRPW 486 T+ NQ G+VI SR+ SD S P LGRPW Sbjct: 236 TNINQKYGLVITNSRVIRESD------SVPAKSYGLGRPW 269
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 2.153e-13 Identity = 36/115 (31.30%), Postives = 58/115 (50.43%), Query Frame = 2 Query: 8 RTIIT-GSRNVVDGSTTFKSATVAVVGEGFLARDITFQN------TAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR 331 +TII G + + S TF S ++ G ITF+N ++ P+K A+ +G D A + +QDTLY R ++ C+I+G +DFIFG A ++ + C + R Sbjct: 100 KTIIAYGDHQLTNTSATFTSYPSNIIITG-----ITFKNKYNIASSSSPTKPAVAAMMLG-DKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLR 208 HSP 2 Score: 38.891 bits (89), Expect = 2.153e-13 Identity = 22/60 (36.67%), Postives = 27/60 (45.00%), Query Frame = 1 Query: 358 VTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 +TAQGR P G V + V GS LGR WK YSR + +S +D I Sbjct: 221 ITAQGRDSPTDKGGFVFKDCT---------VMGSGKALLGRAWKSYSRVIFYRSMFSDNI 271 The following BLAST results are available for this feature:
BLAST of CX307844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307844 ID=CX307844; Name=CX307844; organism=Citrus clementina; type=EST; length=541bpback to top |