CX307851

Overview
NameCX307851
Unique NameCX307851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length464
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.192e-48
Identity = 89/153 (58.17%), Postives = 108/153 (70.59%), Query Frame = 1
Query:    4 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            N WG T YPIVPGHEIVG VT+VG+ V K K GD VG+G LV SC+ CESC    E++C N I TY SI  DGT T+GGYSD +V D+H++LR+P N+PLD+GAPLLCAGIT YSP+KYYG+ +P               AVK+ KAFG +VT
Sbjct:   59 NNWGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGAQVT 211          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.557e-48
Identity = 89/154 (57.79%), Postives = 109/154 (70.78%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEWG++ YP+VPGHEIVG VT+VG  V+KFK G+KVGVG LV+SC  C+SC +G+ENYCP  I TY     D T TYGGYSD +V ++ +V+R PDN+PLDA APLLCAGITVYSPMKY+G+ +P                VK  KA G KVT
Sbjct:   54 KNEWGMSTYPLVPGHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGLGHVGVKFAKAMGTKVT 207          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.318e-47
Identity = 87/154 (56.49%), Postives = 108/154 (70.13%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEWG+T YPIVPGHEIVG VT+VG+ V KFK GD VGVG LV SC  CE+C    EN C   + TY   + DG+ TYGGY+D +V DQH+VLR+P+N+PLD+GAPLLCAGIT YSP++Y+G+ +P               AVK+ KAFG  VT
Sbjct:   35 KNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMAKAFGAHVT 188          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 1.722e-47
Identity = 86/154 (55.84%), Postives = 106/154 (68.83%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEWG+T YP+VPGHEIVG VT+VG  V KF  GDKVGVG +  SC+ C+SC  G ENYCP MILT  + + D T T+GGYSD +V  + +++R PDN+PLD  APLLCAG+TVYSPMKY+G+ +P               AVK  KA G KVT
Sbjct:   54 KNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVT 207          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 4.240e-46
Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 1
Query:    4 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            NE G++NYP+VPGHE+VG VT++G+ V KFK G+ VGVG +V SC+ C +C   +E YC   I TYN ++ DGT T GG++  +VVDQ +V+R P+N+PL+  APLLCAG+TVYSPMK++GMTEP                VKI KAFGL VT
Sbjct:   56 NEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVT 208          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 4.240e-46
Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 1
Query:    4 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            NE G++NYP+VPGHE+VG VT++G+ V KFK G+ VGVG +V SC+ C +C   +E YC   I TYN ++ DGT T GG++  +VVDQ +V+R P+N+PL+  APLLCAG+TVYSPMK++GMTEP                VKI KAFGL VT
Sbjct:   56 NEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVT 208          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 5.538e-46
Identity = 85/154 (55.19%), Postives = 103/154 (66.88%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+WG   YP+VPGHEIVG VT VG  V+KFK GD VGVG  V SC+ C+SC +G ENYCP M++T N  D  G  T GG+SD IVV++HYVLR P  +PLD  APLLCAG+TVYSPM  +G+  P               AVK  KAFG++VT
Sbjct:  128 KNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVT 281          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 9.447e-46
Identity = 88/156 (56.41%), Postives = 106/156 (67.95%), Query Frame = 1
Query:    4 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTE---PXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            N+WG+T YP+VPGHEI G VTKVG NV+ FK GD+VGVG + ASC  CE C++  ENYC  + LTYN I  DG+ TYGGYS ++V  + +V+R PD +PLDA APLLCAGITVYSPMK +GM +                   AVK GKAFGL VT
Sbjct:   57 NDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQADAAGRRLGVVGLGGLGHVAVKFGKAFGLHVT 212          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.234e-45
Identity = 83/154 (53.90%), Postives = 105/154 (68.18%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEW  + YP+VPGHEI+G V+++GN VSKF  GDKVGVG +V SC+ CESC++  ENYC   I TYN +  DGT  YGGYSD IVVD+ Y ++ P  +PL + APLLCAGI++YSPMKY+G+T P                V+  KAFG KVT
Sbjct:   59 KNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYNGVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVGLGGLGHIGVRFAKAFGTKVT 212          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.611e-45
Identity = 85/163 (52.15%), Postives = 112/163 (68.71%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCP-NMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDN--------MPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEW    YP+V GHEI G VT+VG NV++FK GD+VGVG +V +C  CESC+ G ENYC   ++ TYNS+DRDGT+TYGGYSD +VV Q +V+RFP +        +PLD+GAPLLCAG+TVY+PM+ +G+ E                AVK  +AFG++VT
Sbjct:   68 KNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVT 230          
The following BLAST results are available for this feature:
BLAST of CX307851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
MTDH_APIGR1.192e-4858.17Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH8_ARATH1.557e-4857.79Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
MTDH_PETCR1.318e-4756.49Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ARATH1.722e-4755.84Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH7_PICAB4.240e-4653.59Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB4.240e-4653.59Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CAD8B_ORYSJ5.538e-4655.19Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH6_ORYSJ9.447e-4656.41Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CADH6_ARATH1.234e-4553.90Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CADH7_ORYSJ1.611e-4552.15Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC20002G02SK OF2 Citrus clementina cDNA clone C20002G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307851 ID=CX307851; Name=CX307851; organism=Citrus clementina; type=EST; length=464bp
AGAAATGAATGGGGTGTCACCAATTACCCAATTGTTCCCGGGCATGAAAT
TGTTGGTACTGTGACAAAAGTTGGAAATAACGTGTCAAAATTCAAAGAGG
GTGACAAGGTTGGAGTTGGGGTCTTGGTAGCCTCCTGCCAAAAATGTGAA
AGCTGTCAGCAGGGCTTGGAGAATTACTGTCCTAATATGATACTTACATA
TAACTCCATTGATCGTGATGGAACAAAAACTTATGGTGGTTACTCAGATC
TGATTGTTGTTGATCAGCATTATGTGCTCCGCTTTCCTGACAACATGCCT
CTTGATGCGGGTGCACCACTTTTGTGTGCGGGGATCACAGTGTACAGCCC
AATGAAATATTATGGAATGACTGAGCCAGGCAAGCATTTGGGTGTAACAG
GACTTGGTGGGCTTGGCCATGTTGCTGTGAAAATTGGCAAGGCCTTTGGG
TTGAAAGTCACCGT
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