CX307851

Overview
NameCX307851
Unique NameCX307851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length464
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.943e-39
Identity = 75/160 (46.88%), Postives = 102/160 (63.75%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDN------MPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEWG   YP+VPGHEIVG V +VG++V++F  GD VGVG + ++C+ C +C+ G ENYC  ++ ++N+   DG   +GG+S+L VV+Q YV+R P         PLD  APLLCAG+TVY PM+  G+  P               AVK GKAFG+KVT
Sbjct:   53 KNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVT 212          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.615e-37
Identity = 74/155 (47.74%), Postives = 98/155 (63.23%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLD-AGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N++G + YP VPGHE++G V +VG+ V K+K GDKVGVG  V SC+ C++C   LENYCP  ILT      DGT TYGGYSD +VVD+H+V R P+ +PLD  G+  LC G + +SP+KYYG+ +P                 K  K  GLK+T
Sbjct:   59 KNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLGGLGHMVAKFAKTHGLKIT 212          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 3.598e-37
Identity = 70/154 (45.45%), Postives = 101/154 (65.58%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+ G+++YP+VPGHE+VG V +VG++V++FK GD VGVGV+V SC+ C  C+  +E YC   I +YN +  DG  T GG+++ +VV Q +V+R PD M  +  APLLCAG+TVYSP+K++G+ +                 VKI KA G  VT
Sbjct:   55 KNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVT 208          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.367e-36
Identity = 70/154 (45.45%), Postives = 98/154 (63.64%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+ G++NYP+VPGHE+VG V +VG++VSKF  GD VGVG LV  C  C  C++ LE YCP  I +YN +  +G  T GG++   VV Q +V++ P+ M ++  APLLCAG+TVYSP+ ++G+ +P                VKI KA G  VT
Sbjct:   55 KNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVT 208          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.786e-36
Identity = 69/154 (44.81%), Postives = 96/154 (62.34%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+ G++NYP+VPGHE+VG V +VG+ V+KF+ GD VGVG +V SC  C  C   +E YC   I +YN +  DG  T GG++  +VVDQ +V++ PD M  +  APLLCAG+TVYSP+ ++G+ +                 VKI KA G  VT
Sbjct:   55 KNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVT 208          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.332e-36
Identity = 69/154 (44.81%), Postives = 98/154 (63.64%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+ G++NYP+VPGHE+VG V +VG++VSKF  GD VGVGV+V  C  C+ C   LE YC   I +YN +  DG  T GG++D ++V+Q +V++ P+ M ++  APLLCAG+TVYSP+ ++G+                   VKI KA G  VT
Sbjct:   56 KNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVT 209          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.332e-36
Identity = 71/154 (46.10%), Postives = 98/154 (63.64%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+ G++NYP+VPGHE+VG V +VG +VSKFK GD VGVG+LV SC+ C  C++ +E YC   I   N +  DG  T GG+++ +VVDQ++V++ P+ M  +  APLLCAGITVYSP  ++G  +                 VKI KA G  VT
Sbjct:   55 KNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVT 208          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.978e-36
Identity = 71/154 (46.10%), Postives = 97/154 (62.99%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+ G++NYP+VPGHE+VG V +VG +VSKFK GD VGVG+LV SC+ C  C++ +E YC   I   N +  DG  T GG++  +VVDQ +V++ P+ M  +  APLLCAGITVYSP+ ++G  +                 VKI KA G  VT
Sbjct:   55 KNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVT 208          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.974e-35
Identity = 66/154 (42.86%), Postives = 99/154 (64.29%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+ G++NYP+VPGHE+VG V +VG+NV++FK G+ VGVG+LV  C+ C +C   +E YC   I +YN +  DG  T GG+++  VV+Q +V++ P+ +  +  APLLCAG+TVYSP+ ++G+  P                VK+ KA G  VT
Sbjct:   56 KNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVT 209          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.974e-35
Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N  G + YP+VPGHE+VG V +VG  V+K+  GD VGVGV+V  C++C  C+  +E YC   I +YN +  DG  T GG++  +VVDQ +V++ P  +  +  APLLCAG+TVYSP+K++G+T P                VK+ KA G  VT
Sbjct:   55 KNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILGLGGVGHMGVKVAKAMGHHVT 208          
The following BLAST results are available for this feature:
BLAST of CX307851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
CADH9_ORYSJ2.943e-3946.88Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
MTDH3_STYHU1.615e-3747.74Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH_POPDE3.598e-3745.45Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH5_ARATH1.367e-3645.45Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH1_OCIBA1.786e-3644.81Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH4_ARATH2.332e-3644.81Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH2_TOBAC2.332e-3646.10Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH1_TOBAC3.978e-3646.10Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH_MEDSA1.974e-3542.86Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_MAIZE1.974e-3543.51Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]

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Properties
Property NameValue
Genbank descriptionC20002G02SK OF2 Citrus clementina cDNA clone C20002G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307851 ID=CX307851; Name=CX307851; organism=Citrus clementina; type=EST; length=464bp
AGAAATGAATGGGGTGTCACCAATTACCCAATTGTTCCCGGGCATGAAAT
TGTTGGTACTGTGACAAAAGTTGGAAATAACGTGTCAAAATTCAAAGAGG
GTGACAAGGTTGGAGTTGGGGTCTTGGTAGCCTCCTGCCAAAAATGTGAA
AGCTGTCAGCAGGGCTTGGAGAATTACTGTCCTAATATGATACTTACATA
TAACTCCATTGATCGTGATGGAACAAAAACTTATGGTGGTTACTCAGATC
TGATTGTTGTTGATCAGCATTATGTGCTCCGCTTTCCTGACAACATGCCT
CTTGATGCGGGTGCACCACTTTTGTGTGCGGGGATCACAGTGTACAGCCC
AATGAAATATTATGGAATGACTGAGCCAGGCAAGCATTTGGGTGTAACAG
GACTTGGTGGGCTTGGCCATGTTGCTGTGAAAATTGGCAAGGCCTTTGGG
TTGAAAGTCACCGT
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