CX307851

Overview
NameCX307851
Unique NameCX307851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length464
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.019e-15
Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   28 PIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMK 357
            P++ GHE  G V KVG  V++ K GD+VGV  + +SC  CE C +  E  CP++ L+  ++D       G +    + +  +    P+++PL+  AP++CAGIT Y  +K
Sbjct:   64 PLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQLSGYTVD-------GTFQHYCIANATHATIIPESVPLEVAAPIMCAGITCYRALK 166          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.126e-14
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 1
Query:   25 YPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMK 357
            +P++ GHE  G V K+G+NV  +K GD  G+  L  +C  CE C+ G E+ CP        +D  G    G + +    D       P N+ L   AP+LCAGITVY  +K
Sbjct:   64 FPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCP-------YLDGTGFTHDGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALK 167          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.126e-14
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 1
Query:   25 YPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMK 357
            +P++ GHE  G V K+G+NV  +K GD  G+  L  +C  CE C+ G E+ CP        +D  G    G + +    D       P N+ L   AP+LCAGITVY  +K
Sbjct:   64 FPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCP-------YLDGTGFTHDGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALK 167          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.126e-14
Identity = 49/154 (31.82%), Postives = 65/154 (42.21%), Query Frame = 1
Query:    1 RNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKV 459
            + +W + T  P+V GHE  G V  +G NV  +K GD  G+  L  SC  CE CQQG E  C          D  G    G +      D     + P    L   AP+LCAG+TVY  +K   +                  AV+  +A GL+V
Sbjct:   54 KGDWPLATKLPLVGGHEGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNC-------GEADLSGYTHDGSFEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKALKTADLAAGQWVAISGAGGGLGSLAVQYARAMGLRV 200          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 1.471e-14
Identity = 48/147 (32.65%), Postives = 62/147 (42.18%), Query Frame = 1
Query:   19 TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKV 459
            T  P+V GHE  G V  +G NV  +K GD  G+  L  SC  CE C+ G E+ CP+        D  G    G + +    D       P    L   AP+LCAGITVY  +K   +                  AV+  KA G +V
Sbjct:   59 TKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPH-------ADLSGYTHDGSFQEYATADAVQAAHIPQGTDLAEVAPILCAGITVYKALKSANLRAGHWAAISGAAGGLGSLAVQYAKAMGYRV 198          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: ADH2_EMENI (Alcohol dehydrogenase 2 OS=Emericella nidulans GN=alcB PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.471e-14
Identity = 45/124 (36.29%), Postives = 63/124 (50.81%), Query Frame = 1
Query:    4 NEWGVTNYPIVPG----HEIVGTVTKVGNNV--SKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMK 357
            N W +  +P  PG    HE VG V K+G     S  K GD+VGV  + ++C +C  CQ G +  C N  ++       G  T G +   ++    YV   PD +P    APLLCAG+TVY+ +K
Sbjct:   57 NTWKILPFPTQPGQVGGHEGVGKVVKLGAGAEASGLKIGDRVGVKWISSACGQCPPCQDGADGLCFNQKVS-------GYYTPGTFQQYVLGPAQYVTPIPDGLPSAEAAPLLCAGVTVYASLK 173          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: ADH_STAES (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.509e-14
Identity = 35/110 (31.82%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   40 GHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGM 369
            GHE +G V K+ +NV   K GD+V +  + A+C  CE C  G E  C +++    ++D       G  ++ ++VD +Y ++ P+N+   A + + CAG+T Y  +K  G+
Sbjct:   57 GHEGIGRVIKIADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVLNAGYTVD-------GAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGI 159          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 2.509e-14
Identity = 48/154 (31.17%), Postives = 65/154 (42.21%), Query Frame = 1
Query:    1 RNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKV 459
            + +W + T  P+V GHE  G V  +G+NV  +K GD  G+  L  SC  CE C+   E+ CP+        D  G    G +      D       P    L   AP+LCAG+TVY  +K   M                  AV+  KA G +V
Sbjct:   52 KGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPD-------ADLSGYTHDGSFQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKALKTAEMKAGDWVAISGAAGGLGSLAVQYAKAMGFRV 198          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.277e-14
Identity = 46/144 (31.94%), Postives = 68/144 (47.22%), Query Frame = 1
Query:   28 PIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKV 459
            P+V GHE  G V   G  V +F+ GD+ G+  L  SC +CE C+Q  +  C    L+  ++D       G +    +    +  + P  +PLDA AP+LCAGITVY  +K  G+                  A +  KA G++V
Sbjct:   62 PLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQLSGYTVD-------GTFQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGLKEAGVRPGQTVAIVGAGGGLGSLAQQYAKAMGIRV 198          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 4.280e-14
Identity = 48/154 (31.17%), Postives = 64/154 (41.56%), Query Frame = 1
Query:    1 RNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKV 459
            + +W +    P+V GHE  G V   G NV  F+ GD  G+  L  SC  CE C+QG E+ C          D  G    G +      D     + P    L   AP+LCAG+TVY  +K   +                  AV+  KA GL+V
Sbjct:   79 KGDWPLPVKLPLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNC-------LQADLSGYTHDGSFQQYATADAVQAAQIPKGTDLAEIAPILCAGVTVYKALKTADLKPGQWVAISGAAGGLGSLAVQYAKAMGLRV 225          
The following BLAST results are available for this feature:
BLAST of CX307851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
ADH_SCHPO1.019e-1535.45Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
ADH5_YEAST1.126e-1436.94Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS1.126e-1436.94Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
ADH1_CANAL1.126e-1431.82Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]
ADH2_YEAST1.471e-1432.65Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH2_EMENI1.471e-1436.29Alcohol dehydrogenase 2 OS=Emericella nidulans GN=... [more]
ADH_STAES2.509e-1431.82Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH2_KLUMA2.509e-1431.17Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]
ADH1_EMENI3.277e-1431.94Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH4_KLULA4.280e-1431.17Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]

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Properties
Property NameValue
Genbank descriptionC20002G02SK OF2 Citrus clementina cDNA clone C20002G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307851 ID=CX307851; Name=CX307851; organism=Citrus clementina; type=EST; length=464bp
AGAAATGAATGGGGTGTCACCAATTACCCAATTGTTCCCGGGCATGAAAT
TGTTGGTACTGTGACAAAAGTTGGAAATAACGTGTCAAAATTCAAAGAGG
GTGACAAGGTTGGAGTTGGGGTCTTGGTAGCCTCCTGCCAAAAATGTGAA
AGCTGTCAGCAGGGCTTGGAGAATTACTGTCCTAATATGATACTTACATA
TAACTCCATTGATCGTGATGGAACAAAAACTTATGGTGGTTACTCAGATC
TGATTGTTGTTGATCAGCATTATGTGCTCCGCTTTCCTGACAACATGCCT
CTTGATGCGGGTGCACCACTTTTGTGTGCGGGGATCACAGTGTACAGCCC
AATGAAATATTATGGAATGACTGAGCCAGGCAAGCATTTGGGTGTAACAG
GACTTGGTGGGCTTGGCCATGTTGCTGTGAAAATTGGCAAGGCCTTTGGG
TTGAAAGTCACCGT
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