CX307865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307865 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.270e-19 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 181 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTS 486 KRL + L GIS P++++I W I G DT ++G ++L+L F+ DYP K P V+F + FHPN+ G+ICLDILQ++WS YDV IL S Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLS 140
BLAST of CX307865 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.270e-19 Identity = 39/102 (38.24%), Postives = 66/102 (64.71%), Query Frame = 1 Query: 181 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTS 486 KR++++ ++L DP GI+ P D+++ + I GP+ +P++ G F+L L +DYP + P VRF+++++HPNI G ICLD+L+ WSP + +L S Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLS 107
BLAST of CX307865 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.270e-19 Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 163 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTS 486 +ST A KR+ ++ + DPP S P+ ++I W + I GP + ++GG F L + FT +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L S Sbjct: 45 LSTSA-KRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLS 151
BLAST of CX307865 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.270e-19 Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 163 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTS 486 +ST A KR+ ++ + DPP S P+ ++I W + I GP + ++GG F L + FT +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L S Sbjct: 45 LSTSA-KRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLS 151
BLAST of CX307865 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.964e-19 Identity = 43/104 (41.35%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 175 ARKRLMRDFKRLQQDPPAG--ISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAI 477 +R RL +++K +Q++ A I D +I W A+I GP +TP++GG F+L E YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ Sbjct: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSV 107
BLAST of CX307865 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.056e-19 Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 181 KRLMRDFKRLQQDPPAGISGAPQ-DNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTS 486 KRL + L GIS P D++++ W I GP DT ++G FK+++ F +YP PPT+ F S M+HPN+ G+ICLDIL+++WS +Y+V IL S Sbjct: 31 KRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLS 133
BLAST of CX307865 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.625e-19 Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 184 RLMRDFKRLQQDPPAGISGAPQDNS-IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS 486 RLM+++K LQ + I P+D S + W A+I GP DTP++ G F+L + +YP +PPT++FV+++FHPNI + G ICLD+L+ WS IY + ++ S Sbjct: 4 RLMKEYKVLQNEEFEDILLYPRDESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRS 106
BLAST of CX307865 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.126e-18 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 181 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTS 486 KRL ++ L GIS P +I W I GP +T + G T++L+L F YP P V+F++ FHPN+ G+ICLDIL+++WS +YDV IL S Sbjct: 35 KRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLS 136
BLAST of CX307865 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.921e-18 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 181 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTS 486 KR+ ++ + DPP S P+ +++ W + I GP + ++GG F L + F+ +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L S Sbjct: 89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLS 190
BLAST of CX307865 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.921e-18 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 163 MSTPARKRLMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTS 486 M++ A L + K L + P G S G + +I W+ I GP DT ++GG F + F ++YPN PPTVRF S M+HPN+Y+DG +C+ IL +W+P++ V +I+ S Sbjct: 1 MASQASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLS 122 The following BLAST results are available for this feature:
BLAST of CX307865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307865 ID=CX307865; Name=CX307865; organism=Citrus clementina; type=EST; length=488bpback to top |