CX307906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC_ENCCU (Probable aspartyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU06_0790 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.777e-28 Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGL 400 +D+R + FR+ V FR +L F+EI T KLI SSEGG+ +F +DY + A +AQSPQL+KQM+I G F RV+E G V+RAE+S +R+L EF GLD+EMEI Y++V+ + + V+IFD L Sbjct: 158 MDLRAPQTRATFRVVDGVMFFFRTYLRQNGFMEIKTSKLIGSSSEGGANLFSVDYFKRKAFMAQSPQLYKQMAIVGGFKRVYEIGHVYRAEESNINRYLSEFVGLDMEMEICTDYNDVIRFIHSMLVSIFDNL 290
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_ARCFU (Aspartyl-tRNA synthetase OS=Archaeoglobus fulgidus GN=aspS PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.857e-26 Identity = 57/131 (43.51%), Postives = 87/131 (66.41%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFD 394 +D+R Q IFRI+ QV R+FL E F+E+HTPK+++ ++EGG+ +F + Y + A L QSPQL+KQ+ + F +VFE GP+FRAE+ T RHL E +D+EM H + VMD+++RL +++ Sbjct: 124 MDLRRPRVQAIFRIRHQVMQSVREFLSEEGFIEVHTPKIVSTATEGGTELFPISYFEKEAFLNQSPQLYKQVLMAAGFEKVFEIGPIFRAEEHNTTRHLNEAISIDIEMSFTDH-NGVMDVLERLVQRVYE 253
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_PYRHO (Aspartyl-tRNA synthetase OS=Pyrococcus horikoshii GN=aspS PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.284e-26 Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRL 376 +D+R IF+I+S V R+F SE F+EIHTPK+IA ++EGG+ +F L Y + A LAQSPQL+KQM + +VFE P+FRAE+ T RHL E +D EM ++ EVMD+++RL Sbjct: 126 MDLRNPKVMAIFKIRSSVFRAVREFFYSEGFIEIHTPKIIATATEGGTELFPLKYFERDAFLAQSPQLYKQMMMATGLDKVFEIAPIFRAEEHNTTRHLNEAWSIDAEMAFIENEGEVMDLLERL 250
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_PYRAB (Aspartyl-tRNA synthetase OS=Pyrococcus abyssi GN=aspS PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.284e-26 Identity = 59/131 (45.04%), Postives = 83/131 (63.36%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFD 394 +D+R IF+I+S V R+F E F+EIHTPK+IA ++EGG+ +F L Y A LAQSPQL+KQM + +VFE GP+FRAE+ T RHL E +D EM + EVMD+++RL + + + Sbjct: 126 MDLRNPRVMSIFKIRSSVFRATREFFYKEGFIEIHTPKIIATATEGGTELFPLKYFENDAFLAQSPQLYKQMMMSTGLDKVFEIGPIFRAEEHNTTRHLNEAWSIDAEMAFIESEEEVMDLLERLILYVIN 256
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_METKA (Aspartyl-tRNA synthetase OS=Methanopyrus kandleri GN=aspS PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.284e-26 Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIF 391 +D+R Q IF+I++ V R+FL F+E+HTPK+IA ++EGG+ +F + Y + A LAQSPQL+KQM + F RV+E GP+FRAE+ T RHL E +D+EM + +VM +++ L +F Sbjct: 126 LDLRREEPQAIFKIRNVVTTAIREFLEERGFIEVHTPKIIASATEGGTELFPVVYFERDAYLAQSPQLYKQMLMAAGFERVYEIGPIFRAEEHNTRRHLNEAISVDIEMSFIESEEDVMRVLEELLAHVF 255
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC_ENTBH (Probable aspartyl-tRNA synthetase, cytoplasmic OS=Enterocytozoon bieneusi (strain H348) GN=EBI_21705 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.284e-26 Identity = 59/135 (43.70%), Postives = 84/135 (62.22%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNN 406 +D R Q I +I Q FR +L + F+EI T K+I SEGG+ +F L+Y + A LAQSPQL+KQ++I G RV+E G V+RAE S +R+L EF GLD+EME++ Y + + + LF+ IF+ N Sbjct: 159 LDFRLPVTQSIIKIIDQTMYTFRTYLRTHEFIEIKTSKIIQSGSEGGANLFSLNYFNKPAYLAQSPQLYKQLAIIGGLKRVYEIGHVYRAEVSNINRYLSEFVGLDIEMEMETTYIDFIHFLHSLFINIFESFKN 293
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_PYRFU (Aspartyl-tRNA synthetase OS=Pyrococcus furiosus GN=aspS PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.148e-25 Identity = 57/127 (44.88%), Postives = 82/127 (64.57%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFV 382 ID+R IF+I+S V R+F +E F+EIHTPK+IA ++EGG+ +F + Y A LAQSPQL+KQ+ + +VFET P+FRAE+ T RHL E +D E+ ++ EVMD+++ L V Sbjct: 126 IDLRNPKVMAIFKIRSNVFRAIREFFYNEGFIEIHTPKIIATATEGGTELFPIKYFENDAFLAQSPQLYKQIMMATGLDKVFETAPIFRAEEHNTTRHLNEAWSIDAEIAFIENEEEVMDVLENLVV 252
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_AERPE (Aspartyl-tRNA synthetase OS=Aeropyrum pernix GN=aspS PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.196e-24 Identity = 54/123 (43.90%), Postives = 80/123 (65.04%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVD 370 +DIR IF +++ V +FR + S+ FVEI TPK++A +E G+ VF + Y ++A LAQSPQ +KQ ++ RVFE GPVFRAE +T RHL E+ LD+E+ + Y++VM+ V+ Sbjct: 128 LDIRNPMVSAIFELEAMVAKVFRDYYWSQGFVEIFTPKIVAAGTESGAEVFPVVYFDKTAFLAQSPQFYKQFAVIAGLERVFEIGPVFRAEPHHTSRHLNEYHSLDIEVGFIESYNDVMNYVE 250
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_METBF (Aspartyl-tRNA synthetase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=aspS PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.481e-24 Identity = 54/130 (41.54%), Postives = 83/130 (63.85%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIF 391 ID+R +F+I+ Q R++ + F+E TPK++A ++EGG+A+F + Y + A L QSPQL KQ+ + G F RVFE GP+FRAE+ T RHL E T +DVE+ H+ +VM+I++ L ++ Sbjct: 132 IDLRRAETTAVFKIRHQALQATREYFVQNGFIETATPKVVATATEGGTALFPITYFDREAFLNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSIDVEVSFADHF-DVMEILENLVAYVY 260
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_METMA (Aspartyl-tRNA synthetase OS=Methanosarcina mazei GN=aspS PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.546e-24 Identity = 53/130 (40.77%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIF 391 ID+R +F+I+ + R++ + NF+E TPK++A ++EGG+A+F + Y + A L QSPQL KQ+ + G F RVFE GP+FRAE+ T RHL E T +DVE+ H+ +VM++++ L ++ Sbjct: 132 IDLRRAETTAVFKIRHESLRAIREYFVKYNFIETATPKVVATATEGGTALFPITYFDREAFLNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSIDVEVSFADHF-DVMELLENLVAYVY 260 The following BLAST results are available for this feature:
BLAST of CX307906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307906 ID=CX307906; Name=CX307906; organism=Citrus clementina; type=EST; length=409bpback to top |