CX307906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_CLOB6 (Aspartyl-tRNA synthetase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=aspS PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11 Identity = 42/132 (31.82%), Postives = 68/132 (51.52%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS--AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIF 391 +D+R Q IF I+ + + R FL F+E+ TP L + EG V +YKG L QSPQ+ KQ+ + + + F+ FR ED +R EFT +D+E+ + +V+D+ ++L +F Sbjct: 136 LDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLVPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQ-PEFTQIDMELSFVEE-DDVIDLNEKLLAKVF 265
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_CLOB1 (Aspartyl-tRNA synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=aspS PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11 Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS--AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNV 409 +D+R Q IF I+ + + R FL F+E+ TP L + EG V +YKG L QSPQ+ KQ+ + + + F+ FR ED +R EFT +D+E+ + +V+++ +RL +F + + Sbjct: 136 LDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLVPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQ-PEFTQIDMELSFVEE-DDVIELNERLLAKVFKEVGGI 271
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_BORGA (Aspartyl-tRNA synthetase OS=Borrelia garinii GN=aspS PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11 Identity = 44/140 (31.43%), Postives = 72/140 (51.43%), Query Frame = 2 Query: 2 IDIR--TLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS--AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNV 409 +D+R +L N+ I R Q+ ++ R FL+ + F+E+ TP + + EG + +KG L QSPQL+KQ+ + F + F+ +R EDS R EFT LD+EM K + +++ + IF N+ Sbjct: 128 LDLRRDSLKNKIILRCQAT--HLIRNFLVKKKFLELETPTFVKSTPEGARDFVIPSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQ-PEFTQLDLEMSFVKK-ENIFKLIENMLFLIFKNCLNI 263
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_BORBZ (Aspartyl-tRNA synthetase OS=Borrelia burgdorferi (strain ZS7) GN=aspS PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11 Identity = 44/140 (31.43%), Postives = 71/140 (50.71%), Query Frame = 2 Query: 2 IDIR--TLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS--AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNV 409 +D+R +L N+ I R Q+ ++ R FL+ F+E+ TP + + EG + +KG L QSPQL+KQ+ + F + F+ +R EDS R EFT LD+EM K + +++ + IF N+ Sbjct: 128 LDLRRDSLKNKIILRCQAT--HLIRNFLIKRKFLELETPTFVKSTPEGARDFVIPSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQ-PEFTQLDLEMSFVKK-ENIFKLIENMLFLIFKNCINI 263
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_BORBU (Aspartyl-tRNA synthetase OS=Borrelia burgdorferi GN=aspS PE=3 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11 Identity = 44/140 (31.43%), Postives = 71/140 (50.71%), Query Frame = 2 Query: 2 IDIR--TLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS--AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNV 409 +D+R +L N+ I R Q+ ++ R FL+ F+E+ TP + + EG + +KG L QSPQL+KQ+ + F + F+ +R EDS R EFT LD+EM K + +++ + IF N+ Sbjct: 128 LDLRRDSLKNKIILRCQAT--HLIRNFLIKRKFLELETPTFVKSTPEGARDFVIPSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQ-PEFTQLDLEMSFVKK-ENIFKLIENMLFLIFKNCINI 263
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYD_BACCN (Aspartyl-tRNA synthetase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=aspS PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11 Identity = 42/138 (30.43%), Postives = 67/138 (48.55%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS--AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNV 409 +D+R F+++ V R FL +E F+E+ TP L + EG V + G+ L QSPQL KQ+ + G F R ++ FR ED R EFT +D+E E++D+++R+ + + V Sbjct: 132 LDLRRPVMYNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQ-PEFTQIDIEASFLTQ-EEILDMMERMMTKVMKDVKGV 267 The following BLAST results are available for this feature:
BLAST of CX307906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307906 ID=CX307906; Name=CX307906; organism=Citrus clementina; type=EST; length=409bpback to top |