CX307914
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.693e-29 Identity = 53/71 (74.65%), Postives = 58/71 (81.69%), Query Frame = 3 Query: 198 STERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 + RR L Y SC TGNPIDDCWRCD NW NR+RLADC IGFG+NAIGGR GR YVVTDP +DDPVNP+PG Sbjct: 46 NASRRSLAYLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPG 116
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 2.329e-28 Identity = 53/77 (68.83%), Postives = 61/77 (79.22%), Query Frame = 3 Query: 180 EMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 E++ + + RR LG SCGTGNPIDDCWRCD W KNR+RLADC IGFG++AIGGRDG+ YVVTD D D VNPKPG Sbjct: 39 EVNEKINASRRNLGVLSCGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPG 115
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.727e-23 Identity = 50/93 (53.76%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 153 NPDEIASMVEMSTRNSTERRKL-------GYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 +P+ +A V+ S RR+ G C TGNPIDDCW+CD NW NR+ LADCGIGFG+ A+GG+ G+FY VTD DDD VNPKPG Sbjct: 37 DPELVAYQVQWKVNASITRRQALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAVNPKPG 129
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL21_ARATH (Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.258e-22 Identity = 48/90 (53.33%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 144 AVDNPDEIASMVEMSTRNSTERRKLGYFSCGT-GNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 A+ P + + T NST SC GNPID+CWRCD NW NRK LADC +GFGR++IGGR G FY VTD DD+P+NP PG Sbjct: 21 AIPKPPIVRRLSTTVTSNSTAS------SCSANGNPIDECWRCDENWKDNRKNLADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPG 104
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.479e-22 Identity = 50/104 (48.08%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 141 HAVDNPDEIASMVEMSTRNSTERRKLGY-------------FSCGTGNPIDDCWRC-DGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 H +PD +A V S S RR+L SC TGNPIDDCWRC D +W NR+RLADC IGFG +GG++G+ YVVTD D++P NP PG Sbjct: 32 HQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPG 135
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL59_SOLLC (Probable pectate lyase P59 OS=Solanum lycopersicum GN=LAT59 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.788e-20 Identity = 56/135 (41.48%), Postives = 74/135 (54.81%), Query Frame = 3 Query: 18 SVLASVRNEQDVSVSRKMKAESSMNSTMAAKAEVVAEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFS----CGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 S++A + + +V R +A+ + E V A ++ D E+ + T N++ RR LG C NPID CWRCD NW NRK+LADC +GFG AIGG+DG FYVVTD DD +PKPG Sbjct: 23 SLMAHIGHYDEVWRRRAEEAKEYARNIYEPHPENVTLAFNQKLRDTMKELKKV--KGTHNNSTRRGLGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLADCAMGFGSKAIGGKDGEFYVVTD-NSDDYNDPKPG 154
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.976e-19 Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 3 Query: 165 IASMVEMSTRNSTERRKLGYFS----CGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 + + ++T + RR+L C N ID CWRCD NW +NR+++ADC +GFG NAIGG+ GR YVVTD DDD V+PKPG Sbjct: 16 LLTFAALTTATNIPRRQLSNKKYKGPCRAENAIDKCWRCDPNWAENRQKMADCALGFGSNAIGGKLGRIYVVTDNSDDDVVDPKPG 101
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.976e-19 Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 117 VVAEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 ++A L ++ +P+ + V S S RR LGY SCG+GNPID K + C IGFG+NAIGG++GR YVVTD +DDPVNPKPG Sbjct: 12 LLAPLLVISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDRLLAMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPG 109
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL3_ARATH (Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.809e-19 Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 231 CGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 C NPID+CWRCD NW NRK+LADC +GFGR GG+DG YVV D D+D +NPKPG Sbjct: 101 CLAYNPIDNCWRCDRNWANNRKKLADCVLGFGRRTTGGKDGPIYVVKDASDNDLINPKPG 160
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: MPAC1_CHAOB (Major pollen allergen Cha o 1 OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.358e-18 Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 228 SCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 SC + NPID CWR D NW +NR +LADC +GFG +A+GG+ G FY VT DDDPVNP PG Sbjct: 18 SCFSDNPIDSCWRGDANWDQNRMKLADCAVGFGSSAMGGKGGAFYTVTS-SDDDPVNPAPG 77 The following BLAST results are available for this feature:
BLAST of CX307914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307914 ID=CX307914; Name=CX307914; organism=Citrus clementina; type=EST; length=412bpback to top |