CX307949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_METNO (Cytochrome c-type biogenesis protein ccmE OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ccmE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.022e-18 Identity = 62/158 (39.24%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 + RRL + + +A + +VL + +VF+ +PSE Q+ +FRLGGLV EGSV + FVVTD + VRY G LPDLFREG VV EG ++P F A VLAKHDE YMP+EVA A++K Sbjct: 4 KQRRLMLIGVCGAVLAVALGLVLWAMRGTIVFFRSPSEIAS--QAVAPGVRFRLGGLVQEGSVQR-GPDGRVAFVVTDNGATVPVRYQGLLPDLFREGQGVVAEGMLEP---------------------GGMFRADTVLAKHDETYMPREVADALKK 137
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_POLNA (Cytochrome c-type biogenesis protein ccmE OS=Polaromonas naphthalenivorans (strain CJ2) GN=ccmE PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.178e-17 Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 106 IVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 +VL+ FQ LVF+ TPS+ P FR+GG+V GS+ A + F+VTD + V Y GSLPDLF+EG VV +G + + D F A +VLAKHDE YMP E A A+++ Sbjct: 24 LVLSAFQKNLVFFFTPSQVAAG--EAPRNRSFRVGGMVEVGSIERQADGVTVSFLVTDTAQRLRVNYRGSLPDLFKEGKGVVAQGKL---------------------TADQLFVADEVLAKHDENYMPPEAAYALKQ 138
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_BORBR (Cytochrome c-type biogenesis protein ccmE OS=Bordetella bronchiseptica GN=ccmE PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.178e-17 Identity = 59/158 (37.34%), Postives = 76/158 (48.10%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 + RR A +A +VLN + LVF+ +P++ PS FR+GGLV GSV A + FVVTD V ++ V Y G LP LFREG VVV G + D F AT+VLAKHDE YMP + A A+ + Sbjct: 5 RGRRALLIAGGVGLLALAAALVLNALRSNLVFFFSPTQV--HAHEAPSSGSFRVGGLVRAGSVERAADGLTLRFVVTDTVREVPVAYTGLLPALFREGKGVVVAGNM---------------------GADGVFRATEVLAKHDENYMPPQAADALRQ 139
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_METPP (Cytochrome c-type biogenesis protein ccmE OS=Methylibium petroleiphilum (strain PM1) GN=ccmE PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.539e-17 Identity = 58/138 (42.03%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 106 IVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 +VLN FQ LVF+ +P++ K P FRLGGLV GSV + FVVTD V I VRY G LPDLF+EG VV +G + D F A +VLAKHDE YMP E A A+++ Sbjct: 24 LVLNAFQSNLVFFYSPAQVAAK--EAPVGRAFRLGGLVDGGSVQR--DGLVVRFVVTDTVKSIPVRYQGILPDLFKEGKGVVAQGQL---------------------GDDGVFVAREVLAKHDENYMPPEAAEALQR 136
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_METEP (Cytochrome c-type biogenesis protein ccmE OS=Methylobacterium extorquens (strain PA1) GN=ccmE PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.539e-17 Identity = 60/157 (38.22%), Postives = 82/157 (52.23%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIE 516 +SRRL A + +A + ++L+ +VF+ +P+E Q P +FRLGGLV +GSV +EF VTD + V+Y G LPDLFREG +V EG T ++ V F A VLAKHDE YMP+EVA A++ Sbjct: 4 KSRRLILIAACGAVLALALGLILSAMSGSIVFFRSPAEVAA--QGVPPGTRFRLGGLVKDGSVKR-GPDQNVEFAVTDTNATVPVQYRGLLPDLFREGQGIVAEG-----TLDVGGV----------------FRADTVLAKHDENYMPREVADALK 136
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME2_PSEAE (Cytochrome c-type biogenesis protein ccmE OS=Pseudomonas aeruginosa GN=ccmE PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.539e-17 Identity = 57/161 (35.40%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEKNKK 528 ++RR+ S + +VLN FQ LVF+ TPS+ P + FR+GG+V GS+ ++FV+TD V I V Y G LPDLF EG VVV+G + F A +VLAKHDE YMP E A+++ +K Sbjct: 4 RNRRIALIVAGLSALGIATALVLNAFQSNLVFFFTPSQV--SAGEAPLERTFRVGGMVERGSLKRQRGELAVQFVITDTVKAIPVTYSGILPDLFSEGKGVVVQGRLDSAG---------------------LFRAEEVLAKHDENYMPPEAQHALDEVQK 141
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_BORPA (Cytochrome c-type biogenesis protein ccmE OS=Bordetella parapertussis GN=ccmE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.428e-17 Identity = 58/158 (36.71%), Postives = 75/158 (47.47%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 + RR A +A +VLN + LVF+ +P++ PS FR+GGLV GSV A + FVVTD V ++ V Y G LP LFREG VVV G D F AT+VLAKH+E YMP + A A+ + Sbjct: 5 RGRRALLIAGGVGLLALAAALVLNALRSNLVFFFSPTQV--HAHEAPSSGSFRVGGLVRAGSVERAADGLTLRFVVTDTVREVPVAYTGLLPALFREGKGVVVAG---------------------TMGADGVFRATEVLAKHNENYMPPQAADALRQ 139
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_GLUOX (Cytochrome c-type biogenesis protein ccmE OS=Gluconobacter oxydans GN=ccmE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.477e-17 Identity = 56/165 (33.94%), Postives = 83/165 (50.30%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSK--NKFRLGGLVLEGSV--AHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEKNKK 528 ++RRLW +C+ + L F +VF++ PS+ ++NP RLGG+V+ GS+ + + F VTD + V Y G LPDLFREG SVV G ++ +D F+A++VLAKHDE YMP+EVA +++ K Sbjct: 4 KTRRLWIVIACLACVGSAAALTLRAFSSNIVFFMAPSQV----KANPPSPDRTIRLGGMVMAGSLHRINENGTPVNAFEVTDGQAAVEVHYTGILPDLFREGQSVVALGTVQ---------------------KDGGFTASEVLAKHDETYMPKEVADELKRTGK 143
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_METPB (Cytochrome c-type biogenesis protein ccmE OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ccmE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.848e-17 Identity = 58/157 (36.94%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIE 516 +SRRL A + +A + ++L+ +VF+ +P+E Q P +FRLGGLV +GSV +EF VTD + V+Y G LPDLFREG +V EG + F A VLAKHDE YMP+EVA A++ Sbjct: 4 KSRRLILIAACGAVLALALGLILSAMSGSIVFFRSPAEVAS--QGVPPGTRFRLGGLVKDGSVKR-GPDQNVEFSVTDTNATVPVQYRGLLPDLFREGQGIVAEGTL---------------------DAGGVFRADTVLAKHDENYMPREVADALK 136
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_BRUSU (Cytochrome c-type biogenesis protein ccmE OS=Brucella suis GN=ccmE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.848e-17 Identity = 56/160 (35.00%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 40 QMQSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 Q + +RL+ + +A + ++L F + F+ TP++ E Q S +FRLGGLV EGSV+ + SE+ F VTD + + V + G PDLFREG VV EG D F A +VLAKHDE Y+P+++A +++K Sbjct: 24 QRKRKRLFLIGGALAVLAVAVGLMLTAFNQDIRFFRTPADLTE--QDMTSGARFRLGGLVEEGSVSR--TGSELRFTVTDTIKTVKVVFEGIPPDLFREGQGVVAEGRF---------------------GSDGLFRADNVLAKHDENYVPKDLADSLKK 158 The following BLAST results are available for this feature:
BLAST of CX307949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 247
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX307949 ID=CX307949; Name=CX307949; organism=Citrus clementina; type=EST; length=530bpback to top |