CX307949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME1_XANOM (Cytochrome c-type biogenesis protein ccmE 1 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ccmE1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.795e-11 Identity = 44/138 (31.88%), Postives = 65/138 (47.10%), Query Frame = 1 Query: 100 IVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAI 513 + +++ Q + + TPS+ + + +FRLGG+V GS+ A S ++ F V D V Y G LPDLFR+ SV+ N R + F A +VLAKHDE YMP+E+ A+ Sbjct: 23 VTLIVFALQRNMSYLFTPSQV--RAGAAAGYQQFRLGGMVKAGSIQRAADSLKVSFTVIDKNAATPVEYTGILPDLFRDNQSVIA----------------------NGRMQGGRFVANEVLAKHDETYMPKELKDAM 136
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_RICTY (Cytochrome c-type biogenesis protein ccmE OS=Rickettsia typhi GN=ccmE PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.262e-11 Identity = 47/146 (32.19%), Postives = 70/146 (47.95%), Query Frame = 1 Query: 55 RLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMP 492 RL L F I I+L N + ++F+ PS+ E Q + R+GGLV S+ + S++++ FV+TD + D+ + Y G LP LFREG ++ G +S+N F A +LAKHDE Y P Sbjct: 8 RLIKIILCFCSTCLGISIILYNLEKNIIFFFPPSKINEAEQGK----ELRVGGLVKRDSI-NRISANKISFVITDNIKDLEILYQGVLPALFREGQGIIAIG----------------QLSDNK------FIARQLLAKHDENYRP 126
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_RICAE (Cytochrome c-type biogenesis protein ccmE OS=Rickettsia africae (strain ESF-5) GN=ccmE PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.262e-11 Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 1 Query: 43 MQSR---RLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQE 498 MQ R RL T + F I I+L N + +VF++ PS+ E Q + R+GGLV S+ + + ++ FV+TD + D + Y G+LP LFR+G ++ G ++ N K F A +LAKHDE Y P + Sbjct: 1 MQKRVRNRLITIIICFCSACLGISIILYNLEKNIVFFLPPSKINEIEQGK----ELRVGGLVKTDSI-NKIADDKISFVITDNIKDFEILYQGTLPTLFRKGQGIIAIG-------QLSNGK---------------FIARQLLAKHDENYRPPQ 128
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_RHISN (Cytochrome c-type biogenesis protein ccmE OS=Rhizobium sp. (strain NGR234) GN=ccmE PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.262e-11 Identity = 49/136 (36.03%), Postives = 65/136 (47.79%), Query Frame = 1 Query: 100 IVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEG-FIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVA 504 +++V+ F + ++ P + L K P + RLGGLV GSV + F VTD + + V Y G LPDLFREG VV EG F+ + F A VLAKHDE YMP++VA Sbjct: 22 VLLVMFAFSQAVAYFYVPGD-LAKADLAPG-TRIRLGGLVEAGSVKR-GDGKTVTFSVTDTLAVVPVTYTGILPDLFREGQGVVAEGAFV---------------------AGSSVFVADTVLAKHDETYMPKDVA 133
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_PSEA6 (Cytochrome c-type biogenesis protein ccmE OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=ccmE PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.262e-11 Identity = 48/159 (30.19%), Postives = 70/159 (44.03%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKN------KFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVA 504 + +RL + I I ++L + + TPSE ++ Q + R+GG+V+ GSV S + F + D + V Y G LPDLFREG +V G + +EN A +VLAKHDE+YMP E+A Sbjct: 5 RQKRLIVISAIVLVIGAAIGLMLYALSQNIDLFYTPSEVIDGKQIGQVTEVPQVGQRLRIGGMVVPGSVKRDNESLAVSFDLIDTGPIVTVSYQGLLPDLFREGQGIVATGVL---------------TAEN------HIEAHEVLAKHDEEYMPPELA 142
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_RICPR (Cytochrome c-type biogenesis protein ccmE OS=Rickettsia prowazekii GN=ccmE PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.179e-11 Identity = 42/131 (32.06%), Postives = 64/131 (48.85%), Query Frame = 1 Query: 100 IVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMP 492 I I+L N + ++F+ PS+ E Q + R+GGLV S+ + S++++ FV+TD + D+ + Y G LP LFREG ++ G + D F A +LAKHDE Y P Sbjct: 23 ISIILYNLEKNIIFFFPPSKINEAEQGK----ELRVGGLVKRDSI-NKISANKISFVITDNIKDLEILYQGVLPALFREGQGIIAIGQLS----------------------DSKFIARQLLAKHDENYRP 126
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_ANAPZ (Cytochrome c-type biogenesis protein ccmE OS=Anaplasma phagocytophilum (strain HZ) GN=ccmE PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.179e-11 Identity = 44/157 (28.03%), Postives = 75/157 (47.77%), Query Frame = 1 Query: 40 QMQSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAA 510 Q + +R+ A++F + VL + F+ TP+E + S+ R+GG++++GS+ S + F +TDL T++ V Y G LP +F E + +G R D F A ++LAKHDEKYMP++ +++ Sbjct: 2 QRKHKRILFVAVSFIALGCVSAFVLFELSKSISFFCTPTELVAD-PIKSSRYPIRVGGMIVKGSIVRHGDS--VTFSITDLGTELEVTYRGVLPPMFGEDVGAIAKG----------------------RFVDGVFIAEELLAKHDEKYMPKKYSSS 133 The following BLAST results are available for this feature:
BLAST of CX307949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 247
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307949 ID=CX307949; Name=CX307949; organism=Citrus clementina; type=EST; length=530bpback to top |