CX308015

Overview
NameCX308015
Unique NameCX308015
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length530
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: MORA_PSEPU (Morphine 6-dehydrogenase OS=Pseudomonas putida GN=morA PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 1.535e-25
Identity = 64/178 (35.96%), Postives = 96/178 (53.93%), Query Frame = 3
Query:    6 IDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSP------GTTWIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPE 521
            +DY+DLYL+HWP K    ++              +WKA E +   G+ARAIGV NF   +L +L+  + V PAVNQ+E HP + Q+ L    ++ G+    +SP+G             +   L  PV+  +AE  G++ AQV LRW  Q     +PKS N  RI +N+DVFD+++ +
Sbjct:  101 LDYVDLYLLHWPTKDWNATI-------------QSWKAAEKILGDGRARAIGVCNFLEDQLDELIAASDVVPAVNQIELHPYFAQKPLLAKNRALGIVTEAWSPIGGAINDGDGDNHGGRKHPLTDPVITTIAEAHGRSAAQVILRWHFQNDVVAIPKSVNPERIAKNIDVFDFALSD 265          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: YBN4_SCHPO (Uncharacterized oxidoreductase C8E4.04 OS=Schizosaccharomyces pombe GN=SPBC8E4.04 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.420e-25
Identity = 64/176 (36.36%), Postives = 99/176 (56.25%), Query Frame = 3
Query:    6 IDYLDLYLMHWPVKMKKGSVGFKPENLDK--------PDIP--STWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIK--SDVLKHPVVNMVAEKLGK--TPAQVCLRWGLQMGNSLLPKSTNEVRIKEN 491
            ++Y+D YL+HWP  +  G     PE L +         D+P   TW+AME L ++GK R IG+SNF+ + L  +L++A V P ++Q+E HP   Q +  E  K   +H+S YSPL +    +    S +++H  +  +A   G+  TPA + + W ++ G S+LPKS NE RI  N
Sbjct:  108 LEYIDAYLIHWPFALLSG-----PEELPRNEKGELIYEDVPIEETWQAMEELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTIHQMELHPYLPQTEYLEKHKKLQIHVSAYSPLANQNDAYNSDISKLIEHKTLVDIANARGEGITPANIAISWAVKRGTSVLPKSVNESRIVSN 278          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.420e-25
Identity = 66/193 (34.20%), Postives = 110/193 (56.99%), Query Frame = 3
Query:    6 IDYLDLYLMHWPVKMK------KGSVGFKPENLDK---PDIP--STWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSD---------VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPED 524
            +DY+DL+ +H+P+  K      K   GF   + DK    ++P   TW+A+E L D G A++IG+SNFS + + DL+    + P   Q+E HP   Q KL E+ +   + ++GYS  G    ++++ D         +L+ P V  +A+K GK+PAQV LR+  Q G +++P+S +  R+ +NL V D+ + +D
Sbjct:  107 LDYVDLFYIHFPIAQKPVPIEKKYPPGFYCGDGDKWSIEEVPLLDTWRALEKLVDQGLAKSIGISNFSAQLIYDLIRGCTIKPVALQIEHHPYLTQPKLVEYVQLHDIQITGYSSFGP--QSFLEMDLKRALDTPVLLEEPTVKSIADKHGKSPAQVLLRYQTQRGIAVIPRSNSPDRMAQNLSVIDFELTQD 297          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.420e-25
Identity = 68/186 (36.56%), Postives = 108/186 (58.06%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVP--PAVNQVECHPSWQQQKLREFCKSKGVH-LSGYSPLGS-PGTTWIKSD---VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPED 524
            ++DY+DLY++  P+  K G   + K EN      K ++ +TW+A+EA  D+G  +++GVSNF+ ++L  +L    +   P  NQVECHP + Q KL E   S     +  YSPLG+     W+      +LK  ++  + +K  KT AQ+ LR+ +Q G  ++PKST   RIKEN  +FD+S+ ++
Sbjct:  109 KLDYIDLYIIEMPMAFKPGEEFYPKDENGRVIYHKSNLCATWEALEACKDAGLVKSLGVSNFNRRQLEVILNKPGLKYKPVTNQVECHPYFTQTKLLEVSASSMTSFIVAYSPLGTCRNPLWVNVSSPPLLKDELLTSLGKKYNKTQAQIVLRFDIQRGLVVIPKSTTPERIKENFQIFDFSLTKE 294          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: Y2407_MYCS2 (Uncharacterized oxidoreductase MSMEG_2407 OS=Mycobacterium smegmatis GN=MSMEG_2407 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.467e-25
Identity = 63/173 (36.42%), Postives = 87/173 (50.29%), Query Frame = 3
Query:    6 IDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPED 524
            +DY+DLYL+HWP               D      +W  +  + + G AR+IGV NF  + L  ++ +    PAVNQ+E HP   Q  LRE      +    Y PLG          +L HP V  +AE  G+T AQV LRW +Q+GN ++ +S N  RI  NLDVF + +  D
Sbjct:  107 LDYVDLYLIHWP-------------GGDTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYGPLGV-------GRLLDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFELTAD 259          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AK1CD_MESAU (Aldo-keto reductase family 1 member C13 OS=Mesocricetus auratus GN=AKR1C13 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.834e-25
Identity = 69/187 (36.90%), Postives = 108/187 (57.75%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPEN-----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACV--PPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPG-TTWIKSD---VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSI-PEDL 527
            Q++++DL++MH+PV MK G   F  +      LD  D  +TW+A+E   D+G  ++IGVSNF+ ++L  +L    +   P  NQVECH    Q KL ++CKSK + L  +  LG+     W+  D   +L  PV+   A+   ++PA + LR+ +Q G   L +S  E  +KENL VF++ + PED+
Sbjct:  107 QLEHVDLFIMHYPVPMKAGDNDFPLDEQGKLLLDTVDFCATWEALEKXXDAGLVKSIGVSNFNMRQLERILNKPGLKYKPVCNQVECHVYNNQSKLLDYCKSKDIVLVAFGALGTQRYKEWVDQDSPVLLNDPVLCGGAKXXXRSPALIALRYLVQRGVVPLAQSFYESEMKENLQVFEFQLSPEDM 293          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AKCL2_HUMAN (1,5-anhydro-D-fructose reductase OS=Homo sapiens GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.697e-24
Identity = 71/206 (34.47%), Postives = 111/206 (53.88%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPEN-----------------------LDKPD--IPS------TWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACV--PPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPE 521
            +++YLDLYL+HWP+       GFKP +                       LD+ +  IPS      TW+AME L  +G  + IGVSNF+ ++L  LL    +   P  NQ+ECHP   Q+ L  FC+S+ V ++ Y PLG    +    D++ +PV+  +A++ GK+PAQ+ +R+ +Q    ++P S     IKEN+ VFD+ + +
Sbjct:   92 KLNYLDLYLIHWPM-------GFKPPHPEWIMSCSELSFCLSHPRVQDLPLDESNMVIPSDTDFLDTWEAMEDLVITGLVKNIGVSNFNHEQLERLLNKPGLRFKPLTNQIECHPYLTQKNLISFCQSRDVSVTAYRPLGG---SCEGVDLIDNPVIKRIAKEHGKSPAQILIRFQIQRNVIVIPGSITPSHIKENIQVFDFELTQ 287          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: Y4483_MYCA1 (Uncharacterized oxidoreductase MAV_4483 OS=Mycobacterium avium (strain 104) GN=MAV_4483 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.217e-24
Identity = 65/175 (37.14%), Postives = 94/175 (53.71%), Query Frame = 3
Query:    6 IDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSI-PEDL 527
            +DYLDLYL+HWP       V              +++ M    + G  R+IGVSNF+   L  ++E     PAVNQVE HP   Q +LR+      V    YSPLG          +++ P V  +A + G+TPAQV +RW LQ+ N ++ +S+   R+ ENLDVFD+++ PE +
Sbjct:  110 LDYLDLYLIHWPAPKLGKYV-------------ESFEGMIEARERGHVRSIGVSNFTEDLLATVIEETDEVPAVNQVELHPRLNQAELRQVHAQHDVTTQSYSPLGV-------GRLIEEPTVTTIAAEYGRTPAQVLVRWNLQLDNVVVSRSSKPERVAENLDVFDFTLEPEHM 264          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: Y4149_MYCPA (Uncharacterized oxidoreductase MAP_4149 OS=Mycobacterium paratuberculosis GN=MAP_4149 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.217e-24
Identity = 65/175 (37.14%), Postives = 94/175 (53.71%), Query Frame = 3
Query:    6 IDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSI-PEDL 527
            +DYLDLYL+HWP       V              +++ M    + G  R+IGVSNF+   L  ++E     PAVNQVE HP   Q +LR+      V    YSPLG          +++ P V  +A + G+TPAQV +RW LQ+ N ++ +S+   R+ ENLDVFD+++ PE +
Sbjct:  110 LDYLDLYLIHWPAPTLGKYV-------------ESFEGMIEARERGHVRSIGVSNFTEDLLATVIEETNEVPAVNQVELHPRLNQAELRQVHAQHDVTTQSYSPLGV-------GRLIEEPTVTTIAAEYGRTPAQVLVRWNLQLDNVVVSRSSKPERVAENLDVFDFTLEPEHM 264          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AKCL2_MACFA (1,5-anhydro-D-fructose reductase OS=Macaca fascicularis GN=AKR1E2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.895e-24
Identity = 71/206 (34.47%), Postives = 108/206 (52.43%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPEN-----------------------LDKPD--IPS------TWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACV--PPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPE 521
            +++YLDLYL+HWP+       GFKP +                       LD+ D  IP       TW+AME L  +G  + IGVSNF+ ++L  LL    +   P  NQ+ECHP   Q+ L  FC+S+GV ++ Y PLG    +    D++  PV+  +A++  K+PAQ+ +R+  Q    ++P S     IKEN+ VFD+ + +
Sbjct:   92 KLNYLDLYLIHWPM-------GFKPPHPEWIMSCSELSFCLSHPGVHDLPLDESDMVIPGDTDFLDTWEAMEDLVITGLVKNIGVSNFNHEQLERLLNKPGLRFKPVTNQIECHPYLTQKNLISFCQSRGVSVTAYRPLGG---SCEGVDLIDDPVIQRIAKEHSKSPAQILIRFQTQRNVIVIPGSITPSHIKENIQVFDFELTQ 287          
The following BLAST results are available for this feature:
BLAST of CX308015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
MORA_PSEPU1.535e-2535.96Morphine 6-dehydrogenase OS=Pseudomonas putida GN=... [more]
YBN4_SCHPO3.420e-2536.36Uncharacterized oxidoreductase C8E4.04 OS=Schizosa... [more]
XYL1_CANPA3.420e-2534.20NADH-dependent D-xylose reductase OS=Candida parap... [more]
AK1D1_RAT3.420e-2536.563-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
Y2407_MYCS24.467e-2536.42Uncharacterized oxidoreductase MSMEG_2407 OS=Mycob... [more]
AK1CD_MESAU5.834e-2536.90Aldo-keto reductase family 1 member C13 OS=Mesocri... [more]
AKCL2_HUMAN1.697e-2434.471,5-anhydro-D-fructose reductase OS=Homo sapiens G... [more]
Y4483_MYCA12.217e-2437.14Uncharacterized oxidoreductase MAV_4483 OS=Mycobac... [more]
Y4149_MYCPA2.217e-2437.14Uncharacterized oxidoreductase MAP_4149 OS=Mycobac... [more]
AKCL2_MACFA2.895e-2434.471,5-anhydro-D-fructose reductase OS=Macaca fascicu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC20005A10SK OF2 Citrus clementina cDNA clone C20005A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308015 ID=CX308015; Name=CX308015; organism=Citrus clementina; type=EST; length=530bp
TACAGATTGACTACCTTGATCTATACCTTATGCACTGGCCAGTTAAGATG
AAGAAGGGGTCTGTTGGCTTCAAGCCAGAAAACCTTGATAAACCAGATAT
ACCTAGCACGTGGAAAGCAATGGAGGCACTTTATGACTCTGGCAAGGCTC
GAGCGATCGGAGTAAGCAATTTTTCTACAAAGAAGCTTGGAGATTTGTTG
GAAGTGGCATGTGTGCCTCCTGCTGTTAACCAAGTGGAATGCCATCCTTC
ATGGCAGCAGCAAAAGCTTCGTGAATTCTGTAAATCCAAGGGAGTTCACC
TATCTGGGTATTCCCCATTGGGTTCTCCTGGCACAACATGGATCAAGAGT
GATGTCCTCAAGCATCCAGTTGTGAATATGGTTGCTGAGAAATTAGGCAA
AACTCCCGCACAAGTTTGTCTCCGCTGGGGTCTGCAAATGGGTAACAGTT
TGCTTCCCAAGAGCACAAATGAAGTACGGATCAAGGAGAACTTGGATGTC
TTTGACTGGTCCATACCTGAGGACTTACTA
back to top