CX308026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSJ (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica GN=SAMDC PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 6.266e-33 Identity = 74/146 (50.68%), Postives = 95/146 (65.07%), Query Frame = 2 Query: 20 MTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLK--GYSCGEKIYEELGNNGSLIYYSFSRTD----CSTSPRSILKC 439 MT+ SGI I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E VG+D + L++RVL CF P+EFSVA+ + G H T+ +L Y C + +EL G LIY SF T+ SP+S+L C Sbjct: 217 MTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAV-TIFGGHGHAGTWAKELNADAYKCNNMVEQELPCGGLLIYQSFDATEDVPVAVGSPKSVLHC 361
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSI (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica GN=SAMDC PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 1.823e-32 Identity = 74/146 (50.68%), Postives = 95/146 (65.07%), Query Frame = 2 Query: 20 MTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLK--GYSCGEKIYEELGNNGSLIYYSFSRTD----CSTSPRSILKC 439 MT+ SGI I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E VG+D + L++RVL CF P+EFSVA+ + G H T+ +L Y C + +EL G LIY SF T+ SP+S+L C Sbjct: 217 MTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGLAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAV-TIFGGHGHAGTWAKELNADAYKCNNMVEQELPCGGLLIYQSFDATEDVPVAVGSPKSVLHC 361
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_MAIZE (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays GN=SAMDC PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.062e-32 Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = 2 Query: 20 MTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTF--MLDLKGYSCGEKIYEELGNNGSLIYYSFSRTD--CSTSPRSILKC 439 MT+ SGI +I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E +G D + L++RVL CF P+EFSVA+ + G H T+ L + Y C + +EL G L+Y SF + +TSP+S+ C Sbjct: 217 MTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVMGLDATALSYGDLVKRVLRCFGPSEFSVAV-TIFGGRGHAGTWGKALGAEVYDCNNMVEQELPGGGLLVYQSFCAAEDAVATSPKSVFHC 359
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_HORCH (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense GN=SAMDC PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.016e-31 Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 2 Query: 20 MTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTF--MLDLKGYSCGEKIYEELGNNGSLIYYSFSRTD----CSTSPRSILKC 439 MT+ SGI I+P+ E+CDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E G D + +++RVL CF P+EFSVA+ + G H T+ LD + Y C + +EL G LIY SF+ + + SPRS+ C Sbjct: 210 MTKLSGISDIIPEMEVCDFDFEPCGYSMNAINGSAFSTIHVTPEDGFSYASYEVQGMDASALAYGDIVKRVLRCFGPSEFSVAV-TIFGGRGHAATWGKKLDAEAYDCNNVVEQELPCGGVLIYQSFAANEELAVSAGSPRSVFHC 354
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_DICDI (S-adenosylmethionine decarboxylase proenzyme OS=Dictyostelium discoideum GN=amd1 PE=3 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 6.515e-14 Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 23 TEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGD---TFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTD 406 T +SGI +LP S I DF+FDPCGYSMN + + TIH+TPE SY SF+ + + LL +VL FKP F+ AL+++ G GD F +++ Y+ K ++ ++ + D Sbjct: 229 TVNSGIADLLPGSMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVSFDT---NVALADYNQLLAKVLNVFKPGRFTAALYAE-DGAPCGDPYTAFDVNVPSYAIQNKTVHGFDGGYDVVVSNYQQLD 355
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_DROME (S-adenosylmethionine decarboxylase proenzyme OS=Drosophila melanogaster GN=SamDC PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.964e-12 Identity = 39/87 (44.83%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 23 TEDSGIRKILPKSEICDFEFDPCGYSMNSI-EGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSD 280 T SGI ILP I DF FDPCGYSMN I + TIH+TPE+ FSY SFE + + L+ +V+ FKP +F V + ++ Sbjct: 212 TVKSGIDTILPTMHIDDFLFDPCGYSMNGINDKGEYMTIHITPENQFSYVSFET---NVALSNYRKLINQVINTFKPGKFIVTIFAN 295
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_HUMAN (S-adenosylmethionine decarboxylase proenzyme OS=Homo sapiens GN=AMD1 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11 Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 20 MTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 271 +T +SGIR ++P S I F+PCGYSMN ++ D TIH+TPE FSY SFE + L+ +V+ FKP +F L Sbjct: 203 VTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_BOVIN (S-adenosylmethionine decarboxylase proenzyme OS=Bos taurus GN=AMD1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11 Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 20 MTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 271 +T +SGIR ++P S I F+PCGYSMN ++ D TIH+TPE FSY SFE + L+ +V+ FKP +F L Sbjct: 203 VTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_RAT (S-adenosylmethionine decarboxylase proenzyme OS=Rattus norvegicus GN=Amd1 PE=2 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 5.162e-11 Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 20 MTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 271 +T +SGIR ++P S I F+PCGYSMN ++ D TIH+TPE FSY SFE + L+ +V+ FKP +F L Sbjct: 203 VTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_MESAU (S-adenosylmethionine decarboxylase proenzyme OS=Mesocricetus auratus GN=AMD1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.162e-11 Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 20 MTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 271 +T +SGIR ++P S I F+PCGYSMN ++ D TIH+TPE FSY SFE + L+ +V+ FKP +F L Sbjct: 203 VTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284 The following BLAST results are available for this feature:
BLAST of CX308026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308026 ID=CX308026; Name=CX308026; organism=Citrus clementina; type=EST; length=490bpback to top |