CX308548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308548 vs. ExPASy Swiss-Prot
Match: LT01_HORVU (Low temperature-induced protein lt101.1 OS=Hordeum vulgare GN=LT101.1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.086e-20 Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 3 Query: 75 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 233 MGS T LEVILAI+LPPVGVFLRY GVEFWICLLLT+LGYIPGIIYA+YVLV Sbjct: 1 MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53
BLAST of CX308548 vs. ExPASy Swiss-Prot
Match: ESI3_LOPEL (Salt stress-induced hydrophobic peptide ESI3 OS=Lophopyrum elongatum GN=ESI3 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.086e-20 Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 3 Query: 75 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 233 MGS T LEVILAI+LPPVGVFLRY GVEFWICLLLT+LGYIPGIIYA+YVLV Sbjct: 1 MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53
BLAST of CX308548 vs. ExPASy Swiss-Prot
Match: LT02_HORVU (Low temperature-induced protein lt101.2 OS=Hordeum vulgare GN=LT101.2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.031e-20 Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 3 Query: 75 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 233 M S TF+EVILAI+LPPVGVFLRYG VEFWICLLLT+LGYIPGIIYA+YVLV Sbjct: 1 MASATFIEVILAIILPPVGVFLRYGLAVEFWICLLLTLLGYIPGIIYAVYVLV 53
BLAST of CX308548 vs. ExPASy Swiss-Prot
Match: RCI2A_ARATH (Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.532e-19 Identity = 41/52 (78.85%), Postives = 50/52 (96.15%), Query Frame = 3 Query: 75 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 230 M + TF+++I+AILLPP+GVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL Sbjct: 1 MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVL 52
BLAST of CX308548 vs. ExPASy Swiss-Prot
Match: RCI2B_ARATH (Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.194e-17 Identity = 34/52 (65.38%), Postives = 48/52 (92.31%), Query Frame = 3 Query: 75 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 230 M + TF+E+ILAI+LPP+GVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++ Sbjct: 1 MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYII 52
BLAST of CX308548 vs. ExPASy Swiss-Prot
Match: OSR8_ORYSJ (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.704e-16 Identity = 38/50 (76.00%), Postives = 47/50 (94.00%), Query Frame = 3 Query: 87 TFLEVILAILLPPVGVFLRYGC-GVEFWICLLLTVLGYIPGIIYAIYVLV 233 TFLE++LAI+LPP+GVFLR+GC +EF ICLLLT+LGY+PGIIYA+YVLV Sbjct: 8 TFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLV 57
BLAST of CX308548 vs. ExPASy Swiss-Prot
Match: LTI6B_ORYSJ (Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica GN=LTI6B PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.612e-16 Identity = 34/51 (66.67%), Postives = 45/51 (88.24%), Query Frame = 3 Query: 78 GSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 230 G+ +++++AI+LPP+GVFL++GCG EFWICLLLT LGYIPGIIYAIY + Sbjct: 3 GTANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAI 53
BLAST of CX308548 vs. ExPASy Swiss-Prot
Match: LTI6B_ORYSI (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.612e-16 Identity = 34/51 (66.67%), Postives = 45/51 (88.24%), Query Frame = 3 Query: 78 GSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 230 G+ +++++AI+LPP+GVFL++GCG EFWICLLLT LGYIPGIIYAIY + Sbjct: 3 GTANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAI 53
BLAST of CX308548 vs. ExPASy Swiss-Prot
Match: RC21_ARATH (UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana GN=At1g57550 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.867e-16 Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = 3 Query: 75 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 230 MGS FLEV+ AI +PPVGVFLRYG G+EFW+CLLLT+ +IPG+IYAIYVL Sbjct: 1 MGS--FLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVL 50
BLAST of CX308548 vs. ExPASy Swiss-Prot
Match: LTI6A_ORYSJ (Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica GN=LTI6A PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.027e-15 Identity = 32/48 (66.67%), Postives = 44/48 (91.67%), Query Frame = 3 Query: 87 TFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 230 T +++ILAI+LPP+GVF ++GCG+EFWICLLLT GY+PGIIYA++V+ Sbjct: 7 TCIDIILAIILPPLGVFFKFGCGIEFWICLLLTFFGYLPGIIYAVWVI 54 The following BLAST results are available for this feature:
BLAST of CX308548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308548 ID=CX308548; Name=CX308548; organism=Citrus clementina; type=EST; length=426bpback to top |