CX308554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK36_ARATH (Probable WRKY transcription factor 36 OS=Arabidopsis thaliana GN=WRKY36 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.285e-12 Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDK-SFLVATYEGEHNHDV------------QCSSLGQSSSLTNYCSPKSSI-----VHCPDYQTTDSFGSDVTLDLT 282 GQK K NP PRAY+RCSM SS CPV+K+VQRC E++ S + TYEG H+H + +SL QS S ++ S +S+ H TT+S + VTLDLT Sbjct: 212 GQKTAKTNPLPRAYYRCSM-SSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPLPMEASHMAAGTSAAASLLQSGSSSSSSSTSASLSYFFPFHHFSISTTNSHPT-VTLDLT 321
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK74_ARATH (Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.628e-11 Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSS 168 GQK K +P PR Y++CS GCP +K V+RC+E+ S L+ TYEGEHNH SS Sbjct: 271 GQKPIKGSPHPRGYYKCSSVR-GCPARKHVERCVEETSMLIVTYEGEHNHSRILSS 325
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.628e-11 Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSSIV 222 GQKV K NP+PR+Y++C+ + GCPV+K V+R D ++ TYEG+HNHDV + S TN SS V Sbjct: 371 GQKVVKGNPNPRSYYKCT--TIGCPVRKHVERASHDMRAVITTYEGKHNHDVPAAR--GSGYATNRAPQDSSSV 440
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRKY1_MAIZE (Protein WRKY1 OS=Zea mays PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHD 153 GQK K +P PR Y++CS GCP +K V+RC++D S L+ TYEG+HNH+ Sbjct: 341 GQKPIKGSPHPRGYYKCSSVR-GCPARKHVERCVDDPSMLIVTYEGDHNHN 390
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 37/110 (33.64%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQETRPPRNSMQ 330 GQKV + NP+PR+Y++C+ + GCPV+K V+R D ++ TYEG+H+HDV S SS + P+ PD TD+ ++ + ++ G N + ++ Q Sbjct: 390 GQKVVRGNPNPRSYYKCT--AHGCPVRKHVERASHDPKAVITTYEGKHDHDVPTS----KSSSNHEIQPRFR----PD--ETDTISLNLGVGISSDGPNHASNEHQHQNQ 487 The following BLAST results are available for this feature:
BLAST of CX308554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308554 ID=CX308554; Name=CX308554; organism=Citrus clementina; type=EST; length=650bpback to top |