CX308580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12 Identity = 31/66 (46.97%), Postives = 39/66 (59.09%), Query Frame = -2 Query: 43 NVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGD 240 N+ W +I G T +EGG F M F D+YP SPP +F ++HPNVYP G VC+SIL D Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD 102
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12 Identity = 31/66 (46.97%), Postives = 39/66 (59.09%), Query Frame = -2 Query: 43 NVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGD 240 N+ W +I G T +EGG F M F D+YP SPP +F ++HPNVYP G VC+SIL D Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD 102
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12 Identity = 33/79 (41.77%), Postives = 46/79 (58.23%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 +L P G SA D N+F W +I G DT+YE F + FP +YP PPTV+F ++ +HPNV +G +C+ IL Sbjct: 17 NLMMGPSPGISA-FPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDIL 94
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12 Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 D+ +P SAG + N++EW ++I+GPP ++YEGG F +TF YP PP V F + ++H N+ G +C+ IL Sbjct: 58 DITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL 135
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12 Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 D+ +P SAG + N++EW ++I+GPP ++YEGG F +TF YP PP V F + ++H N+ G +C+ IL Sbjct: 58 DITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL 135
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12 Identity = 30/79 (37.97%), Postives = 49/79 (62.03%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 ++ +P SAG + N++EW ++I+GPP ++YEGG F +TF +YP PP V F + ++H N+ G +C+ IL Sbjct: 72 EITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDIL 149
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12 Identity = 30/79 (37.97%), Postives = 49/79 (62.03%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 ++ +P SAG + N++EW ++I+GPP ++YEGG F +TF +YP PP V F + ++H N+ G +C+ IL Sbjct: 72 EITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDIL 149
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12 Identity = 30/79 (37.97%), Postives = 49/79 (62.03%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 ++ +P SAG + N++EW ++I+GPP ++YEGG F +TF +YP PP V F + ++H N+ G +C+ IL Sbjct: 72 EITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDIL 149
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11 Identity = 30/79 (37.97%), Postives = 49/79 (62.03%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 ++ +P SAG + N++EW ++I+GPP ++YEGG F +TF +YP PP V F + ++H N+ G +C+ IL Sbjct: 66 EITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDIL 143
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11 Identity = 30/79 (37.97%), Postives = 49/79 (62.03%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 ++ +P SAG + N++EW ++I+GPP ++YEGG F +TF +YP PP V F + ++H N+ G +C+ IL Sbjct: 66 EITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDIL 143 The following BLAST results are available for this feature:
BLAST of CX308580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308580 ID=CX308580; Name=CX308580; organism=Citrus clementina; type=EST; length=364bpback to top |