CX308587

Overview
NameCX308587
Unique NameCX308587
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10023 contig Ccv1_Contig10023:405..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12
Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query:   16 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNG 315
            ND SG+IP+ L  LK L  +D+ +N+L GEIP+     K+L  L L NN L+G IP+E+  L  L   D+S+N   G IP++       + +   N L+G
Sbjct:  485 NDFSGEIPESLVKLKQLSRLDLSKNQLSGEIPRELRGWKNLNELNLANNHLSGEIPKEVGILPVLNYLDLSSNQFSGEIPLELQNLKLNVLNLSYNHLSG 584          

HSP 2 Score: 70.4774 bits (171), Expect = 6.062e-12
Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255
            L +  N  SG IP E+G+L  ++ +   +N   GEIP+S   LK L  L L+ N+L+G IPREL    +L   +++NN L G IP
Sbjct:  456 LRISKNRFSGSIPNEIGSLNGIIEISGAENDFSGEIPESLVKLKQLSRLDLSKNQLSGEIPRELRGWKNLNELNLANNHLSGEIP 540          

HSP 3 Score: 68.9366 bits (167), Expect = 1.764e-11
Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 1
Query:   13 MNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD 261
            MN ++GKIP  L NL +L S+++++N LEG +P+S    K+L  L+L NN+LTG +P +L   S L+  D+S N   G IP +
Sbjct:  293 MNKLTGKIPDNL-NLLNLESLNLFENMLEGPLPESITRSKTLSELKLFNNRLTGVLPSQLGANSPLQYVDLSYNRFSGEIPAN 374          
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNG 315
            ++L  N   G IP  +  LK+L  ++M +N L+GEIP S ++   L  L L+NN+L G IP EL  L  L   D+SNN L G IP +         +  +NKL G
Sbjct:  488 IDLSRNSFLGSIPSCINKLKNLERVEMQENMLDGEIPSSVSSCTELTELNLSNNRLRGGIPPELGDLPVLNYLDLSNNQLTGEIPAELLRLKLNQFNVSDNKLYG 592          

HSP 2 Score: 68.9366 bits (167), Expect = 1.764e-11
Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKF-----------------------LRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255
            +ELY N +SGK+P+ +GNL  L + D+ QN L GE+P+  A L+ + F                        ++ NN  TG++PR L   S++  FDVS N   G +P
Sbjct:  273 IELYDNRLSGKLPESIGNLTELRNFDVSQNNLTGELPEKIAALQLISFNLNDNFFTGGLPDVVALNPNLVEFKIFNNSFTGTLPRNLGKFSEISEFDVSTNRFSGELP 380          

HSP 3 Score: 68.5514 bits (166), Expect = 2.303e-11
Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255
            L L  +++ G+IP  + NL  L ++D+  N L GEIP+S   L+S+  + L +N+L+G +P  +  L++L+ FDVS N L G +P
Sbjct:  225 LRLTHSNLVGEIPDSIMNLVLLENLDLAMNSLTGEIPESIGRLESVYQIELYDNRLSGKLPESIGNLTELRNFDVSQNNLTGELP 309          

HSP 4 Score: 67.781 bits (164), Expect = 3.929e-11
Identity = 30/85 (35.29%), Postives = 56/85 (65.88%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255
            L+L MN ++G+IP+ +G L+S+  +++Y N+L G++P+S  NL  L+   ++ N LTG +P ++  L  L  F++++N   G +P
Sbjct:  249 LDLAMNSLTGEIPESIGRLESVYQIELYDNRLSGKLPESIGNLTELRNFDVSQNNLTGELPEKIAAL-QLISFNLNDNFFTGGLP 332          
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.554e-12
Identity = 39/118 (33.05%), Postives = 62/118 (52.54%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFP-MESFENNKLNGPELQGLVPYDFG 351
            L+L+  ++SG +  ELG L  L  +    NK+ G IPK   N+KSL+ L LN N L G++P EL  L +L    +  N + G +P     +SF  +   ++  +N   + G +P + G
Sbjct:   88 LQLFSMNLSGNLSPELGRLSRLTILSFMWNKITGSIPKEIGNIKSLELLLLNGNLLNGNLPEELGFLPNLDRIQIDENRISGPLP-----KSFANLNKTKHFHMNNNSISGQIPPELG 200          

HSP 2 Score: 68.1662 bits (165), Expect = 3.008e-11
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 1
Query:   16 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255
            N ++G +P+ELG L +L  + + +N++ G +PKSFANL   K   +NNN ++G IP EL +L  +    + NN L G +P
Sbjct:  141 NLLNGNLPEELGFLPNLDRIQIDENRISGPLPKSFANLNKTKHFHMNNNSISGQIPPELGSLPSIVHILLDNNNLSGYLP 220          
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.641e-12
Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVS-MDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENN 303
            L+L  N+ SG +P  +  L  LV+ +D+  N   GEIP   +N+  L  L L +N+ TG++P +L  L  LK F VS+N L G IP       F  E F NN
Sbjct:  105 LDLSRNNFSGPLPANISTLIPLVTILDLSYNSFSGEIPMLISNITFLNTLMLQHNQFTGTLPPQLAQLGRLKTFSVSDNRLVGPIPNFNQTLQFKQELFANN 206          
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.641e-12
Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNK 306
            +++  N +SG IP+ LGN+ SL+ +D+ QNKL GEIP S ++L+SL F  ++ N L+G +P  L+   +   F V N+ LCG   V  P  + P  S E  +
Sbjct:  299 MDISGNSVSGHIPETLGNISSLIHLDLSQNKLTGEIPISISDLESLNFFNVSYNNLSGPVPTLLSQKFNSSSF-VGNSLLCG-YSVSTPCPTLPSPSPEKER 398          

HSP 2 Score: 69.3218 bits (168), Expect = 1.350e-11
Identity = 40/98 (40.82%), Postives = 52/98 (53.06%), Query Frame = 1
Query:   16 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKL 309
            N I G +P EL  L  L  MD+  N + G IP++  N+ SL  L L+ NKLTG IP  ++ L  L  F+VS N L G +P     + F   SF  N L
Sbjct:  280 NRIRGTLPSELSKLTKLRKMDISGNSVSGHIPETLGNISSLIHLDLSQNKLTGEIPISISDLESLNFFNVSYNNLSGPVPT-LLSQKFNSSSFVGNSL 376          
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.062e-12
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255
            + L +N +SG+IPKE GN  SL  +D+  N   G IP+   NL  LK L L++NKLTG++P  L  L ++  F +++  L GTIP
Sbjct:  151 ISLLVNRLSGEIPKEFGN-SSLTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIP 234          
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.062e-12
Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPME--SFENNKLNG 315
            L L+ N I+G +P+ LG LKSL  + ++ N+L G IP S  N   L+ L L++N+LTG+IP  LT  + L   ++S N L G +PV    RS+ +     ++N L+G
Sbjct:  123 LSLHNNVIAGSVPRSLGYLKSLRGVYLFNNRLSGSIPVSLGNCPLLQNLDLSSNQLTGAIPPSLTESTRLYRLNLSFNSLSGPLPV-SVARSYTLTFLDLQHNNLSG 228          

HSP 2 Score: 68.1662 bits (165), Expect = 3.008e-11
Identity = 34/86 (39.53%), Postives = 48/86 (55.81%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPV 258
            L+   N I+G IP    NL SLVS+++  N L+G IP +   L +L  L L  NK+ G IP  +  +S +K  D+S N   G IP+
Sbjct:  292 LDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIPDAIDRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLSENNFTGPIPL 377          
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.917e-12
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 1
Query:   16 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLC-GTIPVDGPFRSFPMESFENNKLNGPELQGLVP 339
            N  +G IP+ LG +++L  + + +N+L G+IP S  NL +L+ L L++NK TGS+P  LT+L+ L   DVSNN L    +P   PF    + S    +L   +L G VP
Sbjct:  231 NQFTGSIPESLGLVQNLTVLRLDRNRLSGDIPSSLNNLTNLQELHLSDNKFTGSLP-NLTSLTSLYTLDVSNNPLALSPVPSWIPF----LNSLSTLRLEDIQLDGPVP 334          
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.034e-11
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255
            L+L  + ++GKI  ++ NL  L  +D+  NKL G +P+  AN+KSL F+ L+NN L GSIP+ L    +LK+    N  LC T P
Sbjct:  419 LDLSSHKLTGKIVPDIQNLTQLQKLDLSNNKLTGGVPEFLANMKSLLFINLSNNNLVGSIPQALLDRKNLKLEFEGNPKLCATGP 503          
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.350e-11
Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 1
Query:    1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPE 321
            L L  N +SG++P ELGNL ++  M +  N   GEIP +FA L +L+  R+++N+L+G+IP  +   + L+   +  +GL G IP+        ++    + LNGPE
Sbjct:  139 LVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWTKLERLFIQASGLVGPIPI-AIASLVELKDLRISDLNGPE 244          

HSP 2 Score: 68.5514 bits (166), Expect = 2.303e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query:   16 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255
            N ++G IPKE GN+ +L S+ +  N+L GE+P    NL +++ + L++N   G IP     L+ L+ F VS+N L GTIP
Sbjct:  120 NRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIP 199          
The following BLAST results are available for this feature:
BLAST of CX308587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
RLK5_ARATH1.595e-1239.00Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
HSL2_ARATH2.083e-1239.05LRR receptor-like serine/threonine-protein kinase ... [more]
Y1684_ARATH3.554e-1233.05Probable LRR receptor-like serine/threonine-protei... [more]
Y5838_ARATH4.641e-1239.22Probably inactive leucine-rich repeat receptor-lik... [more]
IMK3_ARATH4.641e-1239.22Probable leucine-rich repeat receptor-like protein... [more]
RKF1_ARATH6.062e-1243.53Probable LRR receptor-like serine/threonine-protei... [more]
IMK2_ARATH6.062e-1239.25Probably inactive leucine-rich repeat receptor-lik... [more]
Y5977_ARATH7.917e-1239.45Probable leucine-rich repeat receptor-like protein... [more]
Y5169_ARATH1.034e-1142.35Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH1.350e-1135.51Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC21001F02Rv AbsLeaSub1 Citrus clementina cDNA clone C21001F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308587 ID=CX308587; Name=CX308587; organism=Citrus clementina; type=EST; length=547bp
TTGGAGCTTTACATGAATGACATAAGTGGGAAAATTCCGAAAGAGTTAGG
TAATTTGAAAAGCCTTGTCAGCATGGATATGTATCAGAATAAACTGGAAG
GAGAAATACCAAAGTCCTTTGCCAATTTGAAGTCACTTAAATTTCTGCGG
TTGAACAACAACAAACTAACAGGATCAATTCCGAGGGAGCTGACCACCCT
GTCGGACCTCAAAGTTTTTGATGTTTCTAACAATGGTCTCTGTGGGACAA
TCCCTGTTGATGGTCCTTTTAGAAGCTTTCCTATGGAGAGTTTTGAAAAT
AATAAACTCAATGGACCAGAGCTGCAAGGACTGGTGCCTTATGATTTTGG
ATGCTGAAGAAGGTTGAAAACCCTCCGTCTTCTATTGAAGACCATAATGT
TAAAGACTCGTATAGGGTAAAATTATATCGTGTGCATCAGCTTGATCGAA
TGGCTAGATATATTATGTCAGCGGCAGTGACTGTTCATGTATGAAGTAAC
TAAAGCAATTAAAATAAGATTATGTAAGCTTATTTAAAAATCCACAA
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