CX308599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.604e-16 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = -3 Query: 20 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 349 LK + T PT+ E + + FT +D+GG + R LW+ YF G++F+VD+ D +R EAR EL +L+ +EL L+ NK D P A++ E+ +GL+ Sbjct: 40 LKNDRLATLQPTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLY 149
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: ARL17_HUMAN (ADP-ribosylation factor-like protein 17 OS=Homo sapiens GN=ARL17 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 6.013e-16 Identity = 36/51 (70.59%), Postives = 42/51 (82.35%), Query Frame = -3 Query: 197 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQG 349 LKLGE V +PT+GF VETVEYKN +F VWDVG KIRPLW+H+FQNT+G Sbjct: 37 LKLGETVPAVPTVGFCVETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKG 87
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: AR13B_DANRE (ADP-ribosylation factor-like protein 13B OS=Danio rerio GN=arl13b PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.854e-16 Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 14 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 319 PT+GF+ ++ T++D+GG +IR +W++Y+ + G++FVVDS+D RI E RD + +L + +LV ANKQD AM A+I + L L L Sbjct: 51 PTVGFSKVDLKQGKFEVTIFDLGGGKRIRGIWKNYYSESYGVVFVVDSSDVQRIQETRDTMAEVLRHPRIAGKPVLVLANKQDQDGAMAEADIIETLSLEKL 152
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: AR13B_HUMAN (ADP-ribosylation factor-like protein 13B OS=Homo sapiens GN=ARL13B PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.026e-15 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 2 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH 319 PT+GF+ + T++D+GG +IR +W++Y+ + G+IFVVDS+D +R+ E ++ + ML + +LV ANKQD A+ A++ + L L L H Sbjct: 51 PTVGFSKINLRQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEH 156
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.340e-15 Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = -3 Query: 20 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 349 LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+VD+ D DR EA+ EL +L+ +EL ++ NK D P A++ E+ +LGL+ Sbjct: 40 LKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLY 149
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.285e-15 Identity = 38/109 (34.86%), Postives = 62/109 (56.88%), Query Frame = -3 Query: 23 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 349 LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+VD+ D +R+ EA+ E+ +L+ +EL +V NK D P A++ E+ +LGL Sbjct: 40 LKNDRVAILQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEELAKVPFVVLGNKIDHPEAVSEDELRQRLGL 148
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: AR13B_MOUSE (ADP-ribosylation factor-like protein 13B OS=Mus musculus GN=Arl13b PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.285e-15 Identity = 36/106 (33.96%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 2 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH 319 PT+GF+ + T++D+GG +IR +W++Y+ + G+IFVVDS+D +R+ E ++ + +L + +LV ANKQD A+ A++ + L L L H Sbjct: 51 PTVGFSKIDLRQGKFQVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEH 156
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_CHAGB (Small COPII coat GTPase SAR1 OS=Chaetomium globosum GN=SAR1 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.091e-15 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = -3 Query: 20 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 349 LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+VD+ D +R EA+ EL +L+ +EL +V NK D P+A++ E+ +LG++ Sbjct: 40 LKNDRVAILQPTLHPTSEELSIGNVRFTTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVVLGNKIDHPDAVSEDELRHQLGMY 149
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.683e-15 Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = -3 Query: 20 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 349 LK + PT+ E + N+ FT +D+GG + R LWR YF G++F+VD+ D +R+ E++ EL +L +EL++ ++ NK D P A++ ++ LGL+ Sbjct: 36 LKNDRVAVLQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKNTPFVILGNKIDHPEAVSEDQLRATLGLY 145
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_TRIRE (Small COPII coat GTPase sar1 OS=Trichoderma reesei GN=sar1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14 Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = -3 Query: 20 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 349 LK + PT+ E + N+ F +D+GG + R +WR YF + G++F+VD+ D +R EA+ EL +L+ +EL ++ NK D P+A++ E+ +LGL+ Sbjct: 40 LKNDRVAILQPTLHPTSEELAIGNVRFNTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLY 149 The following BLAST results are available for this feature:
BLAST of CX308599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308599 ID=CX308599; Name=CX308599; organism=Citrus clementina; type=EST; length=351bpback to top |