CX308599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_ASPOR (Small COPII coat GTPase sar1 OS=Aspergillus oryzae GN=sar1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.351e-14 Identity = 38/110 (34.55%), Postives = 60/110 (54.55%), Query Frame = -3 Query: 20 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 349 LK + PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL +L +EL L+ NK D P+A++ E+ +LGL+ Sbjct: 40 LKNDRVAVLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLY 149
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: ARFRP_PONAB (ADP-ribosylation factor-related protein 1 OS=Pongo abelii GN=ARFRP1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.351e-14 Identity = 33/103 (32.04%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 41 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI 349 + L +I TT+ G N+ TV+ WD+GGQ++++ LW Y+ G+I+V+DS D +R+ E++ +++ + L +LV ANKQD+ ++ +I Sbjct: 48 MSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVETCLSIPDI 147
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: ARFRP_HUMAN (ADP-ribosylation factor-related protein 1 OS=Homo sapiens GN=ARFRP1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.351e-14 Identity = 33/103 (32.04%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 41 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI 349 + L +I TT+ G N+ TV+ WD+GGQ++++ LW Y+ G+I+V+DS D +R+ E++ +++ + L +LV ANKQD+ ++ +I Sbjct: 48 MSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVETCLSIPDI 147
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.600e-14 Identity = 38/110 (34.55%), Postives = 60/110 (54.55%), Query Frame = -3 Query: 20 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 349 LK + PT+ E + N+ FT +D+GG + R LWR YF G++++VD D +R+ E++ EL +L +EL L+ NK D P A++ E+ LGL+ Sbjct: 40 LKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLY 149
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.600e-14 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = -3 Query: 17 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHS 349 LK + T PT+ E + ++ FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL + +EL L+ NK D +A+ E+ LGL++ Sbjct: 40 LKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYN 150
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.600e-14 Identity = 38/110 (34.55%), Postives = 60/110 (54.55%), Query Frame = -3 Query: 20 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 349 LK + PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL +L +EL L+ NK D P+A++ E+ +LGL+ Sbjct: 40 LKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLY 149
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: ARF_ENCCU (ADP-ribosylation factor OS=Encephalitozoon cuniculi GN=ARF-1 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 9.600e-14 Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = -3 Query: 29 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKL 349 L+ GE+ T+PT+GFN E V ++ F VWD+GGQ+ W Y G+I++VD D R ++ +EL R+LN LLV ANK DL +E+ + Sbjct: 45 LQTGEVHQTVPTLGFNCENVTLGSMKFQVWDIGGQNSFMRFWHQYINEGCGIIYMVDCADPQRFGKSGEELWRILNILN-SPRPLLVLANKIDLIREHERSEVVKSI 150
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_ASPTN (Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sar1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.638e-13 Identity = 38/110 (34.55%), Postives = 60/110 (54.55%), Query Frame = -3 Query: 20 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 349 LK + PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL +L +EL L+ NK D P+A++ E+ +LGL+ Sbjct: 40 LKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLY 149
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.638e-13 Identity = 38/100 (38.00%), Postives = 57/100 (57.00%), Query Frame = -3 Query: 23 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 322 +PT GFN + KN + ++G +R W+ + L+F+VDS DR R+ AR EL ++L+ D D +++ ANKQDL AMN E+ +LGL Sbjct: 106 VPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDP--DLPVVIVANKQDLSGAMNMVELQQELGL 203
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.139e-13 Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = -3 Query: 23 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 349 LK + T PT E + +I FT +D+GG + R LW+ YF G++F+VD+ D +R EAR EL + EL+ ++ NK D P+A++ E+ LGL Sbjct: 43 LKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGL 151 The following BLAST results are available for this feature:
BLAST of CX308599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308599 ID=CX308599; Name=CX308599; organism=Citrus clementina; type=EST; length=351bpback to top |