CX308599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.365e-12 Identity = 33/112 (29.46%), Postives = 62/112 (55.36%), Query Frame = -3 Query: 14 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 349 LK I +PT+ E + ISFT +D+GG + R +W+ YF ++F++D D +R+ E+R EL +L ++++ +L+ NK D P A++ ++ +L + + Sbjct: 41 LKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQHM 152
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.365e-12 Identity = 28/101 (27.72%), Postives = 61/101 (60.40%), Query Frame = -3 Query: 20 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 322 +PT+ E + ++FT +D+GG + R +W++Y G++F+VD D +R++E+++EL ++ ++ + + +L+ NK D P A++ + + GL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLY 154
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.365e-12 Identity = 28/101 (27.72%), Postives = 61/101 (60.40%), Query Frame = -3 Query: 20 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 322 +PT+ E + ++FT +D+GG + R +W++Y G++F+VD D +R++E+++EL ++ ++ + + +L+ NK D P A++ + + GL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLY 154
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.365e-12 Identity = 28/101 (27.72%), Postives = 61/101 (60.40%), Query Frame = -3 Query: 20 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 322 +PT+ E + ++FT +D+GG + R +W++Y G++F+VD D +R++E+++EL ++ ++ + + +L+ NK D P A++ + + GL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLY 154
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.880e-12 Identity = 28/101 (27.72%), Postives = 62/101 (61.39%), Query Frame = -3 Query: 20 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 322 +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R+VE++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLY 154
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.880e-12 Identity = 28/101 (27.72%), Postives = 62/101 (61.39%), Query Frame = -3 Query: 20 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 322 +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R+VE++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLY 154
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.002e-11 Identity = 27/101 (26.73%), Postives = 62/101 (61.39%), Query Frame = -3 Query: 20 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 322 +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R++E++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLY 154
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.002e-11 Identity = 27/101 (26.73%), Postives = 62/101 (61.39%), Query Frame = -3 Query: 20 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 322 +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R++E++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLY 154
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.614e-11 Identity = 34/112 (30.36%), Postives = 56/112 (50.00%), Query Frame = -3 Query: 14 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 349 LK T PT + + +I F +D+GG + R LW Y N+ G++F+VDS D R E+R L +L+ +L +L+ +NK D+ A++ + G+ L Sbjct: 40 LKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHL 151
BLAST of CX308599 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.614e-11 Identity = 27/101 (26.73%), Postives = 62/101 (61.39%), Query Frame = -3 Query: 20 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 322 +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R++E++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGLY 154 The following BLAST results are available for this feature:
BLAST of CX308599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308599 ID=CX308599; Name=CX308599; organism=Citrus clementina; type=EST; length=351bpback to top |