CX308603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308603 vs. ExPASy Swiss-Prot
Match: RF1_HALMA (Peptide chain release factor subunit 1 OS=Haloarcula marismortui GN=prf1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.185e-12 Identity = 43/118 (36.44%), Postives = 60/118 (50.85%), Query Frame = -3 Query: 37 GTIVTDDGKEKKVTIDFE-PFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYI 387 G T G+ VT E P PI + Y CD++F T+ L +L FG IV+D G L G E + S +P K +GGQSA RFARLR+E N+ ++ A +A ++ Sbjct: 99 GAFDTGGGRTDMVTKVLESPPDPIESFRYHCDSEFLTEPLEHMLADKGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPGKQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFV 216
BLAST of CX308603 vs. ExPASy Swiss-Prot
Match: RF1_PICTO (Peptide chain release factor subunit 1 OS=Picrophilus torridus GN=prf1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.772e-12 Identity = 39/117 (33.33%), Postives = 58/117 (49.57%), Query Frame = -3 Query: 37 GTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYI 387 G I T + + T EP PI +Y CD+ FH + L L+ D +G IV+D G L G EV+ +P KH +GGQS+ RF RL +++ +K E+A ++ Sbjct: 92 GHIATRGDQTEMYTKIIEPPEPIQTFMYKCDSNFHLEQLESQLKEKDIYGLIVIDRKEATVGFLKGTRIEVVDYEQSLVPSKHHQGGQSSRRFERLIEIAANDFFKKIGEIANNAFM 208
BLAST of CX308603 vs. ExPASy Swiss-Prot
Match: RF1_HALSA (Peptide chain release factor subunit 1 OS=Halobacterium salinarium GN=prf1 PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = -3 Query: 37 GTIVTDDGKEKKVTIDFE-PFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYI 387 G + + G+ VT E P +PI + Y CD+ F T+ L E+L +G IV+D + G L G + + +P K +GGQSA RFARLR+E N+ ++ A +A ++ Sbjct: 99 GAVDSGGGRTDMVTEVLESPPQPIESFRYHCDSAFLTEPLAEMLGDKGLYGLIVLDRRESNVGWLKGKRVQPVKSAESLVPGKQRKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFV 216
BLAST of CX308603 vs. ExPASy Swiss-Prot
Match: RF1_HALS3 (Peptide chain release factor subunit 1 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=prf1 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = -3 Query: 37 GTIVTDDGKEKKVTIDFE-PFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYI 387 G + + G+ VT E P +PI + Y CD+ F T+ L E+L +G IV+D + G L G + + +P K +GGQSA RFARLR+E N+ ++ A +A ++ Sbjct: 99 GAVDSGGGRTDMVTEVLESPPQPIESFRYHCDSAFLTEPLAEMLGDKGLYGLIVLDRRESNVGWLKGKRVQPVKSAESLVPGKQRKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFV 216 The following BLAST results are available for this feature:
BLAST of CX308603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308603 ID=CX308603; Name=CX308603; organism=Citrus clementina; type=EST; length=389bpback to top |