CX308613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308613 vs. ExPASy Swiss-Prot
Match: HBL_HORVU (Non-symbiotic hemoglobin OS=Hordeum vulgare GN=HB PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 3.805e-46 Identity = 87/119 (73.11%), Postives = 106/119 (89.08%), Query Frame = 1 Query: 88 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAASVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 444 F+EE+EALV+KSW +MKK++ LGL+FFL+IFEIAPSA+++F FLRDS+VPLE N KLKTHA SVFVMTCE+A QLRKAGK+TVRE+TLK+LG H KYGV + HFEVT+F+LLETIKE Sbjct: 10 FSEEKEALVLKSWAIMKKDSANLGLRFFLKIFEIAPSARQMFPFLRDSDVPLETNPKLKTHAVSVFVMTCEAAAQLRKAGKITVRETTLKRLGGTHLKYGVADGHFEVTRFALLETIKE 128
BLAST of CX308613 vs. ExPASy Swiss-Prot
Match: HBL1_ORYSJ (Non-symbiotic hemoglobin 1 OS=Oryza sativa subsp. japonica GN=HB1 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 9.372e-45 Identity = 84/120 (70.00%), Postives = 107/120 (89.17%), Query Frame = 1 Query: 85 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAASVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 444 +F+EEQEALV+KSW ++KK++ + L+FFL+IFE+APSA ++FSFLR+S+VPLE+N KLKTHA SVFVMTCE+A QLRKAGKVTVR++TLK+LGA H KYGV + HFEV KF+LL+TIKE Sbjct: 13 SFSEEQEALVLKSWAILKKDSANIALRFFLKIFEVAPSASQMFSFLRNSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHLKYGVGDAHFEVVKFALLDTIKE 132
BLAST of CX308613 vs. ExPASy Swiss-Prot
Match: HBL3_ORYSJ (Non-symbiotic hemoglobin 3 OS=Oryza sativa subsp. japonica GN=HB3 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 8.772e-43 Identity = 81/119 (68.07%), Postives = 104/119 (87.39%), Query Frame = 1 Query: 88 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAASVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 444 FTEEQEALV+KSW +MK ++ +G +FFL+IFE+APSA++LFSFLR+S+VPLE+N KLK HA +VFVMTCE+A QLRK G+VTVR++T+K+LG+ HFK GV + HFEV KF+LLETIKE Sbjct: 16 FTEEQEALVLKSWAIMKNDSAHIGHRFFLKIFEVAPSARQLFSFLRNSDVPLEKNPKLKIHAMAVFVMTCEAAAQLRKTGRVTVRDTTIKRLGSTHFKNGVSDAHFEVAKFALLETIKE 134
BLAST of CX308613 vs. ExPASy Swiss-Prot
Match: HBL4_ORYSJ (Non-symbiotic hemoglobin 4 OS=Oryza sativa subsp. japonica GN=HB4 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.685e-41 Identity = 78/119 (65.55%), Postives = 102/119 (85.71%), Query Frame = 1 Query: 88 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAASVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 444 FTEEQEALV+KSW +MK ++ +G +FFL+IFE+APSA+ LFSFLR+S+VPLE+N LK HA +VFVMTCE+A QLRK G+VTVR++T+K+LG+ HFK GV + HFEV +F+LLETIK+ Sbjct: 13 FTEEQEALVLKSWAIMKDDSANIGHRFFLKIFEVAPSARHLFSFLRNSDVPLEKNPNLKKHAMAVFVMTCEAAAQLRKTGRVTVRDTTIKRLGSTHFKNGVSDTHFEVARFALLETIKD 131
BLAST of CX308613 vs. ExPASy Swiss-Prot
Match: HBL2_ARATH (Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana GN=AHB2 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 9.098e-32 Identity = 66/119 (55.46%), Postives = 89/119 (74.79%), Query Frame = 1 Query: 88 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAASVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 444 FTE+QEALV +SW ++K++ + L FF +I EIAP+A+ LFSFLRDS+ N KLK HA VF MTCE+A+QLR+ GKV V ++TL+ LG++H K GV++ HFEV K +LL T+KE Sbjct: 6 FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKAHAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKE 124
BLAST of CX308613 vs. ExPASy Swiss-Prot
Match: HBL2_BRANA (Non-symbiotic hemoglobin 2 OS=Brassica napus GN=HB2 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.552e-31 Identity = 65/119 (54.62%), Postives = 90/119 (75.63%), Query Frame = 1 Query: 88 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAASVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 444 FTE+QEALV +SW ++K++ + L FF +I EIAP+A+ +FSFLRD++ N KLK HA VF MTCE+A+QLR+ GKV V ++TL+ LG+VHFK GV++ HFEV K +L+ T+KE Sbjct: 6 FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKDMFSFLRDTDEVPHNNPKLKAHAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSVHFKSGVLDPHFEVVKEALVRTLKE 124
BLAST of CX308613 vs. ExPASy Swiss-Prot
Match: HBL2_SOLLC (Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum GN=HB2 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.992e-30 Identity = 65/119 (54.62%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 88 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAASVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 444 FT++QEALV SW MK++ +L L+FF I EIAP A+ +FSFL+DS+ E N KL+ HA VF MTCESA+QLR+ G+V V E+TLK LG++H + V + HFEV K +LL T+KE Sbjct: 3 FTDKQEALVRDSWEFMKQDIPQLSLRFFSLILEIAPVAKNMFSFLKDSDELPENNPKLRAHAVKVFKMTCESAIQLREKGEVVVGETTLKYLGSIHLQKRVADPHFEVVKEALLRTVKE 121
BLAST of CX308613 vs. ExPASy Swiss-Prot
Match: HBL2_GOSHI (Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum GN=HB2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.992e-30 Identity = 66/119 (55.46%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 88 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAASVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 444 FTE+QE LV +SW V+K++ L+FF I EIAP A+ +FSFLR+S + N KLK HA VF MTCESA+QLR+ G+V V ++TLK LG VH K GV + HFEV K +LL TI+E Sbjct: 3 FTEKQEGLVKESWEVLKQDIPHSSLRFFSLILEIAPGAKNMFSFLRESEEIPQNNPKLKAHAVKVFKMTCESAIQLREKGEVVVADTTLKYLGTVHVKSGVKDPHFEVVKEALLRTIEE 121
BLAST of CX308613 vs. ExPASy Swiss-Prot
Match: HBL0_PHYPA (Non-symbiotic hemoglobin 0 OS=Physcomitrella patens GN=GLB0 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.564e-26 Identity = 55/120 (45.83%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 82 RAFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAASVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIK 441 + +++E E LV +SW ++KK+A G+ FF ++FEIAP A+ ++SFLRDS +P E+N K+K HA VF+MT ++AVQL + G V ES L+KL A H GV ++ FE+ K ++L I+ Sbjct: 22 KTYSKENEQLVKQSWEILKKDAQRNGINFFRKVFEIAPGAKAMYSFLRDSTIPFEENPKVKNHARYVFMMTGDAAVQLGEKGAYQVLESKLQKLAATHVNAGVTDDQFEIVKEAILYAIE 141
BLAST of CX308613 vs. ExPASy Swiss-Prot
Match: HBPA_CASGL (Hemoglobin A OS=Casuarina glauca GN=SYMA PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.273e-25 Identity = 59/120 (49.17%), Postives = 79/120 (65.83%), Query Frame = 1 Query: 85 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAASVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 444 A TE QEAL+ +SW V+K+N L+ F I E AP ++ +FSFL+DSN E N KLK HAA +F CESA +LR+ G+ +TLK+LG++H K + + HFEV K +LL TIKE Sbjct: 2 ALTERQEALLKQSWEVLKQNIPGHSLRLFALIIEAAPESKYVFSFLKDSNEIPENNPKLKAHAAVIFKTICESATELRQKGQAVWDNNTLKRLGSIHLKNKITDPHFEVMKGALLGTIKE 121 The following BLAST results are available for this feature:
BLAST of CX308613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308613 ID=CX308613; Name=CX308613; organism=Citrus clementina; type=EST; length=446bpback to top |