CX308650

Overview
NameCX308650
Unique NameCX308650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 2.238e-28
Identity = 60/153 (39.22%), Postives = 95/153 (62.09%), Query Frame = 2
Query:   11 VNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            V E D+KNL Y +A++KE +R+ P  PL IP   I++  I+GY++P  T + +N W + RD + W   P +F+PERFL   K++D +G ++E +PFGSGRR CPG+     ++E   A LL  F+F  P+    + ++M    GL++ K++ L
Sbjct:  342 VTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFL--EKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHL 492          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.238e-28
Identity = 62/148 (41.89%), Postives = 92/148 (62.16%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLS 436
            K  V+  D++ L Y+++++KE MR++P  PL IP    EEC ++GY +P   +++INVW + R+P  WE+P  F PERF    +D    G +FE +PFG+GRR CPG++F L  +E  LA LL+ FD+          +DM EA GL+
Sbjct:  335 KTSVDVDDVQELKYMKSVVKETMRMHPPIPL-IPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDF--MGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLT 479          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.238e-28
Identity = 62/148 (41.89%), Postives = 92/148 (62.16%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLS 436
            K  V+  D++ L Y+++++KE MR++P  PL IP    EEC ++GY +P   +++INVW + R+P  WE+P  F PERF    +D    G +FE +PFG+GRR CPG++F L  +E  LA LL+ FD+          +DM EA GL+
Sbjct:  335 KTSVDVDDVQELKYMKSVVKETMRMHPPIPL-IPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDF--MGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLT 479          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.923e-28
Identity = 60/149 (40.27%), Postives = 96/149 (64.43%), Query Frame = 2
Query:   11 VNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSIQKARPL 457
            V   D++ LVY++ ++KE  RL+  SP+ IP +++    I GY++   T++ +N W + R+P VW++P +F PERF+    +++ +G +FELLPFGSGRR CP +   L  +E+TLA LL+ FD+   + E V + EA GL+  +  PL
Sbjct:  347 VTYDDLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFV--DSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDW--KATEEVSVEEAPGLTSHRKHPL 491          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.818e-28
Identity = 56/155 (36.13%), Postives = 98/155 (63.23%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            K ++ E D++ + YL+ ++KE  RL+P  P  +P + + +  I GY++P +  + I+ + + RDP+ W  P +F PERF   +  I+ +GQ++ELLPFG+GRR+CPG++  + ++E  L  +L+ FD++ P+    + +DM E   L+I K  PL
Sbjct:  341 KERITEEDLEKVEYLKLVIKETFRLHPPGPFLLPRQVMSDIEIQGYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERF--ANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPL 493          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.986e-28
Identity = 53/142 (37.32%), Postives = 85/142 (59.86%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFD-FATPSNEPVDMGEALG 430
            Q+ E D   L YLQA++KE +RL  A PL +PH ++ +  + GY++P  +++++N W L  +P  W++P +F+PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  T+  L+  F+    P    +D  E  G
Sbjct:  345 QITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGKSKIDTSEKGG 486          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.986e-28
Identity = 52/142 (36.62%), Postives = 87/142 (61.27%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALG 430
            QV E D+  L YLQA++KE +RL  A PL +PH ++ +  ++GY++P  +++++N W L  +P  W++P +F+PERF      ++  G +F  +PFG GRR+CPG+  AL ++  T+  ++  F+   P  +  VD  E  G
Sbjct:  345 QVTEPDLHKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSEKGG 486          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.986e-28
Identity = 61/141 (43.26%), Postives = 89/141 (63.12%), Query Frame = 2
Query:   23 DIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLS 436
            D++ L Y+++++KE MR++P  PL IP    EEC ++GY +P   +++INVW + R+P  WE+P  F PERF    KD    G +FE +PFG+GRR CPG++F L  +E  LA LL+ FD+          +DM EA GL+
Sbjct:  343 DVQELKYMKSVVKETMRMHPPIPL-IPRSCREECVVNGYTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSKDF--MGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLT 480          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.986e-28
Identity = 64/144 (44.44%), Postives = 91/144 (63.19%), Query Frame = 2
Query:   14 NESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN-EP--VDMGEALGLS 436
            +E+D+++L YL+ ++KE MRL+   PL +P +  +E  I+GY +P  T++++NVW L RDP+ W++   F+PERF      ID  G NFE LPFG GRR CPG SF L      LA LL  FD+  P+  EP  +D+ E  G+S
Sbjct:  344 DENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYWDDVECFKPERF--EQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGMS 485          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.986e-28
Identity = 59/157 (37.58%), Postives = 94/157 (59.87%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRH--KDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            +  V E ++  +  L+A++KE +RL+P  PL +PH S++ C ++GY +P +T++V+N W L R    WE   +F PERFL+      +D++   F+ L FGSGRR CPGV  A   +E  L+ L++ FD+  P+    E VDM E  G+++ +   L
Sbjct:  375 QEMVTEDNLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKL 531          
The following BLAST results are available for this feature:
BLAST of CX308650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
C83A1_ARATH2.238e-2839.22Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENSP2.238e-2841.89Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR2.238e-2841.89Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71B6_ARATH2.923e-2840.27Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71B8_ARATH3.818e-2836.13Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_CATRO4.986e-2837.32Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_ARATH4.986e-2836.62Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C71DF_MENPI4.986e-2843.26Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71D6_SOLCH4.986e-2844.44Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71C4_MAIZE4.986e-2837.58Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC21002C11Rv AbsLeaSub1 Citrus clementina cDNA clone C21002C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308650 ID=CX308650; Name=CX308650; organism=Citrus clementina; type=EST; length=459bp
GAAAAGGCAAGTGAATGAGTCAGATATAAAGAATTTAGTTTACTTGCAAG
CCATTCTCAAAGAAGCAATGCGTTTGTATCCTGCTTCGCCACTCTCAATT
CCACACAAGTCTATAGAAGAGTGCACGATTAGTGGTTATAATGTCCCTAC
CAGCACACAACTTGTTATCAATGTTTGGAAGCTTCAACGTGATCCACGTG
TCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACAAGGCAC
AAGGATATTGACGTCAGAGGACAAAATTTTGAATTGTTACCTTTTGGTAG
TGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTATGGAAT
TTACACTTGCTGCTTTACTTCATGGCTTTGATTTTGCAACCCCATCAAAT
GAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAAAGCTAG
ACCACTTGA
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