CX308650

Overview
NameCX308650
Unique NameCX308650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.512e-28
Identity = 58/131 (44.27%), Postives = 88/131 (67.18%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP 394
            K  V+ S+++ L Y+++++KE +RL+P  PL IP +S EEC I+G+ +P  T+++IN W + RDP  WE+P  F+PERF    +D    G +FE +PFG+G+R CPG+ F L  +E  LA LL+ FD+  P
Sbjct:  333 KTSVDLSEMQELKYMRSVVKETLRLHPPFPL-IPRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDF--MGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLP 460          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.512e-28
Identity = 59/153 (38.56%), Postives = 90/153 (58.82%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            ++ + D++ L Y + +LKE  R+ P  P+ +P  + ++  I+GY+VP  T + +N+W +   P +W++P  F PERF+    D   +G NFELLPFGSGRR CPG+   L V+  TL  LL+ FD+  P+    E + + E  GL   K  PL
Sbjct:  336 EITDDDVEQLDYFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDF--KGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPL 486          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 8.505e-28
Identity = 51/142 (35.92%), Postives = 86/142 (60.56%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALG 430
            Q+ E D   L YLQA++KE +RL  A PL +PH ++ +  ++GY++P  +++++N W L  +P  W++P  F+PERFL     ++  G +F  +PFG GRR+CPG+  AL ++  T+  ++  F+   P  +  +D  E  G
Sbjct:  345 QITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSEKGG 486          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 8.505e-28
Identity = 61/154 (39.61%), Postives = 94/154 (61.04%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            R+V ESDI+ L YL+  LKE +R++P  PL + H++ E+ +I G+ +P  ++++IN + + RDP  W +P  F+P RFL      D +G NFE +PFGSGRR+CPG+   L  ++  +A +LH F +  P       +DM +  GL+  KA  L
Sbjct:  357 RRVEESDIEKLTYLKCTLKETLRMHPPIPLLL-HETAEDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVP-DFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGLTAPKATRL 508          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 8.505e-28
Identity = 56/153 (36.60%), Postives = 96/153 (62.75%), Query Frame = 2
Query:   11 VNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFAT---PSNEPVDMGEALGLSIQKARPL 457
            + E +++N+ YL+A++KE  R++P  PL +P    E+  + GY++   T+++IN W + RDP +W  +  +F+PER L     +D  GQ+ + +PFGSGRR CPG++ A+ ++E TLA L+  FD++    P+ +  D+ E  GL + +  PL
Sbjct:  339 IKEKEVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHL--DSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDLAEDFGLDVCRKNPL 489          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.451e-27
Identity = 60/141 (42.55%), Postives = 89/141 (63.12%), Query Frame = 2
Query:   23 DIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLS 436
            D++ L Y+++++KE MR++P  PL IP    EEC ++GY +P   +++INVW + R+P  WE+P  F PERF    +D    G +FE +PFG+GRR CPG++F L  +E  LA LL+ FD+          +DM EA GL+
Sbjct:  345 DVQELKYMKSVVKETMRMHPPIPL-IPRSCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDF--MGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEGLT 482          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.895e-27
Identity = 50/142 (35.21%), Postives = 87/142 (61.27%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALG 430
            Q+ E D++ L YLQA++KE +R   A PL +PH ++ +  ++GY++P  +++++N W L  +P  W +P +F+PERFL     ++  G +F+ +PFG GRR+CPG+  AL ++   +  L+  F+   P  +  +D  E  G
Sbjct:  346 QICEPDVQKLPYLQAVIKETLRYRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAEKGG 487          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.895e-27
Identity = 61/153 (39.87%), Postives = 94/153 (61.44%), Query Frame = 2
Query:   11 VNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWE-EPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF---ATPSNEPVDMGEALGLSIQKARPL 457
            V E + + + YLQA++KEA+RL P +PL +P    E+ T+ GYN+P  TQ++IN W +QRD   W  +  +F+PER L     +D +GQ+F+ +PFGSG+R CPG+ F   ++  TLA ++  F++     P     D+ EA GL + +  PL
Sbjct:  333 VTEKEAEKMDYLQAVIKEALRLRPPAPLMVPRVFSEDVTLKGYNIPAGTQVIINAWAIQRDTTTWGIDAEEFRPERHL--DSILDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPL 483          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.232e-27
Identity = 52/142 (36.62%), Postives = 87/142 (61.27%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALG 430
            QV E D+  L YLQA++KE +RL  A PL +PH ++ +  ++G+++P  +++++N W L  +P  W++P +F+PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  T+  L+   +   P  +  +D  E  G
Sbjct:  346 QVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPGQSKIDTSEKGG 487          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.513e-27
Identity = 52/142 (36.62%), Postives = 84/142 (59.15%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALG 430
            Q+ E D   L YL A++KE +RL  A PL +PH ++ +  + G+++P  +++++N W L  +P  W+ P +F+PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  TL  L+  F+   P  +  +D  E  G
Sbjct:  345 QITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGG 486          
The following BLAST results are available for this feature:
BLAST of CX308650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
C7D94_MENGR6.512e-2844.27Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71B1_THLAR6.512e-2838.56Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
TCMO_RUTGR8.505e-2835.92Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C84A1_ARATH8.505e-2839.61Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71AI_ARATH8.505e-2836.60Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71DD_MENPI1.451e-2742.55Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
TCMO_PETCR1.895e-2735.21Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C71AJ_ARATH1.895e-2739.87Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
TCMO_MEDSA3.232e-2736.62Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
TCMO_POPTM5.513e-2736.62Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]

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Properties
Property NameValue
Genbank descriptionC21002C11Rv AbsLeaSub1 Citrus clementina cDNA clone C21002C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308650 ID=CX308650; Name=CX308650; organism=Citrus clementina; type=EST; length=459bp
GAAAAGGCAAGTGAATGAGTCAGATATAAAGAATTTAGTTTACTTGCAAG
CCATTCTCAAAGAAGCAATGCGTTTGTATCCTGCTTCGCCACTCTCAATT
CCACACAAGTCTATAGAAGAGTGCACGATTAGTGGTTATAATGTCCCTAC
CAGCACACAACTTGTTATCAATGTTTGGAAGCTTCAACGTGATCCACGTG
TCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACAAGGCAC
AAGGATATTGACGTCAGAGGACAAAATTTTGAATTGTTACCTTTTGGTAG
TGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTATGGAAT
TTACACTTGCTGCTTTACTTCATGGCTTTGATTTTGCAACCCCATCAAAT
GAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAAAGCTAG
ACCACTTGA
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