CX308650

Overview
NameCX308650
Unique NameCX308650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.513e-27
Identity = 59/153 (38.56%), Postives = 95/153 (62.09%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP---SNEPVDMGEALGLSIQKARPL 457
            +V+E+ I  L YL+A + E +RL+P  PL +  +  + C I+GY++P  + +++N + +  D + W EP +F PERF+     ID +G NFE LPFG+GRR CPG+++ +  +E  LA LL+ FD+  P    NE +D+ E  G+++ K   L
Sbjct:  328 KVDETCIYELKYLKAFINEVLRLHPPGPL-VFRECRQACEINGYHIPAKSTVLVNTFAIGTDSKYWAEPERFCPERFID--SSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGVTVSKKEDL 477          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 5.513e-27
Identity = 59/153 (38.56%), Postives = 94/153 (61.44%), Query Frame = 2
Query:   11 VNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF---ATPSNEPVDMGEALGLSIQKARPL 457
            V E + + + YLQA++KEA+RL P +PL +P    E+  + GYN+P  TQ+++N W +QRD   W  +  +F+PER L    ++D +GQ+F+ +PFGSG+R CPG+ F   ++  TLA ++  F++     P     D+ EA GL + +  PL
Sbjct:  340 VTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHL--DTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPL 490          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.403e-27
Identity = 52/142 (36.62%), Postives = 84/142 (59.15%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALG 430
            Q+ E D   L YL A++KE +RL  A PL +PH ++ +  + G+++P  +++++N W L  +P  W+ P +F+PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  TL  L+  F+   P  +  +D  E  G
Sbjct:  345 QITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGG 486          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.403e-27
Identity = 57/156 (36.54%), Postives = 89/156 (57.05%), Query Frame = 2
Query:   14 NESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFL-----TRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            +E  +  L Y + ++KE +RL+P  PL +P    E C + G+ V   T++++N W L R P  W +P +F+PERF      +    +D RG  FE +PFGSGRR CPG +F L  +E  +A LL+ FD++ P     E +DM   +G ++++   L
Sbjct:  348 HEGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRNHL 503          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.604e-26
Identity = 60/139 (43.17%), Postives = 85/139 (61.15%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDM 415
            Q +E  I NL Y++ ++KE MRL P  PL +PH   E C I GY V   T++VIN W + R P  W++  +F+PERF       D +G  FE LPFG+GRR CPG +F + ++E  +A LL+ FD++ P+    + VDM
Sbjct:  368 QDHEGLIDNLRYMKMVIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERF--EDGMADYKGSRFEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDWSLPAGMQPDDVDM 504          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.736e-26
Identity = 60/153 (39.22%), Postives = 90/153 (58.82%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN-EP--VDMGEALGLSIQKARPL 457
            Q +E  ++NL Y++ ++KE +RL P  PL +PH   E C I GY +   T+++IN W + R P  W++  KF PERF       D +G  FE LPFG+GRR CPG  FA+  +E  +A LL+ FD++ P   +P  +DM   +G + ++   L
Sbjct:  338 QDHEGLLENLSYMKLVIKETLRLNPVLPLLLPHLCRETCEIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERF--EDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGATARRKNHL 488          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 7.960e-26
Identity = 57/152 (37.50%), Postives = 95/152 (62.50%), Query Frame = 2
Query:   14 NESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWE-EPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF---ATPSNEPVDMGEALGLSIQKARPL 457
            +  +++++ YL+A++KE +RL+P  PL +     ++  + GY++   TQ++ N W +QRD   W  +  +F+PER L     +D RG NFE +PFGSGRR CPG+ FA+ ++E TLA L++ F++   A  S +  D+ EA G+ + +  PL
Sbjct:  340 SHEEVEDMKYLKAVIKEGLRLHPPFPLLVLRLLTQDVKLKGYDIAAGTQVITNAWAIQRDIVTWGIDAEEFRPERHLD--SPLDFRGTNFEYIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMDARLSGDEYDLAEATGIDVCRKFPL 489          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.773e-25
Identity = 55/153 (35.95%), Postives = 90/153 (58.82%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRG-QNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFD-FATPSNEPVDMGEALGLSIQKARPL 457
            ++V+E+DI+ + YL A++KE +R +P +  ++ H   E   ++GY++P  T +   V  +  DP VW +P KF P+RFL+  +D D+ G +  +++PFG GRR CPG+  A   +   LA ++  F+ FA P N  VD  E L  ++    PL
Sbjct:  339 KKVDENDIEKMPYLNAVVKELLRKHPPTYFTLTHSVTEPVKLAGYDIPMDTNVEFFVHGISHDPNVWSDPEKFDPDRFLSGREDADITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPGNNKVDFSEKLEFTVVMKNPL 491          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.316e-25
Identity = 61/154 (39.61%), Postives = 91/154 (59.09%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHK---DIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSIQKARPL 457
            R V E+D+ NL YLQAI+KE +RL+P  P+    K  E C I G+ +P  T+L +NV+ + RDP  WE+P +F+PERFL   +   + + R    + +PFGSGRRACPG   A  V+   +  ++  FD+     E ++M E   +++  A PL
Sbjct:  350 RLVQETDLPNLPYLQAIVKEGLRLHPPGPVVRTFK--ETCEIKGFYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFLASSRLGEEDEKREDMLKYIPFGSGRRACPGSHLAYTVVGSVIGMMVQHFDWII-KGEKINMKEGGTMTLTMAHPL 500          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.961e-24
Identity = 52/147 (35.37%), Postives = 86/147 (58.50%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRG-QNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSI 439
            + +++E DI+ + YL A++KE +R +P + +S+ H   E   + GY++PT   + I +  +  DP +W EP KF P+RF    +D D+ G    +++PFG GRR CPG++ A   +   LA L+  F++A P N  VD  E L  ++
Sbjct:  351 ENKIDEKDIEKMPYLNAVVKELLRKHPPTYMSLTHAVTEPAKLGGYDIPTGVNVEIFLPGISDDPNLWSEPEKFDPDRFYLGKEDADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWADPENTRVDFTEKLEFTV 497          
The following BLAST results are available for this feature:
BLAST of CX308650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
C71DB_LOTJA5.513e-2738.56Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71AK_ARATH5.513e-2738.56Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
TCMO_POPKI9.403e-2736.62Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C99A1_SORBI9.403e-2736.54Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C99A2_ORYSJ1.604e-2643.17Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C99A3_ORYSJ2.736e-2639.22Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C71AF_ARATH7.960e-2637.50Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C77A1_SOLME1.773e-2535.95Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
THAD_ARATH2.316e-2539.61Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C77A2_SOLME1.961e-2435.37Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]

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Properties
Property NameValue
Genbank descriptionC21002C11Rv AbsLeaSub1 Citrus clementina cDNA clone C21002C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308650 ID=CX308650; Name=CX308650; organism=Citrus clementina; type=EST; length=459bp
GAAAAGGCAAGTGAATGAGTCAGATATAAAGAATTTAGTTTACTTGCAAG
CCATTCTCAAAGAAGCAATGCGTTTGTATCCTGCTTCGCCACTCTCAATT
CCACACAAGTCTATAGAAGAGTGCACGATTAGTGGTTATAATGTCCCTAC
CAGCACACAACTTGTTATCAATGTTTGGAAGCTTCAACGTGATCCACGTG
TCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACAAGGCAC
AAGGATATTGACGTCAGAGGACAAAATTTTGAATTGTTACCTTTTGGTAG
TGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTATGGAAT
TTACACTTGCTGCTTTACTTCATGGCTTTGATTTTGCAACCCCATCAAAT
GAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAAAGCTAG
ACCACTTGA
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