CX308650

Overview
NameCX308650
Unique NameCX308650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 2.561e-24
Identity = 50/152 (32.89%), Postives = 88/152 (57.89%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRG-QNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSIQKARPL 457
            ++V E D++ + YL+A++ E +R +P     +PH   E+  + GY VP +  +   V ++ RDP  WEEP  F+PERF+   + +D+ G +  +++PFG+GRR CPG+  A+  +E+ +A ++  F +       VD+ E L  ++    PL
Sbjct:  345 KEVEEEDVEKMPYLKAVVLEGLRRHPPGHFLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQGHEVDLTEKLEFTVVMKHPL 496          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.731e-24
Identity = 47/134 (35.07%), Postives = 82/134 (61.19%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE 403
            +R V ESDI  L Y++AIL+EA RL+P +  ++PH ++ + T++GY++P  +Q++++ + L R+P+VW +P  F+PER L    ++ +   +   + F +G+R C   +    +    LA LL GF +  P NE
Sbjct:  374 ERLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDATVAGYHIPKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKLPENE 507          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.271e-23
Identity = 56/153 (36.60%), Postives = 86/153 (56.21%), Query Frame = 2
Query:   14 NESDIKNLVYLQAILKEAMRLYPASPLSIPHK--SIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRH--KDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP-SNEPVDMGEALGLSIQKARPL 457
            ++ D+  + YLQA++KE +R +P  PL    +  + +    +G  VP  T  ++N+W +  D  VW +P  F PERF+      D+DVRG +  L PFG+GRR CPG +  L  +   +A L+H FD+  P  + PV + E L LS++   PL
Sbjct:  391 SDGDVARMPYLQAVVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLDEVLKLSLEMKTPL 543          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.831e-23
Identity = 47/134 (35.07%), Postives = 82/134 (61.19%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE 403
            +R V ESDI  L Y++AIL+EA RL+P +  ++PH ++ + T++GY++P  +Q++++ + L R+P+VW +P  F+PER L    ++ +   +   + F +G+R C   +    +    LA LL GF +  P NE
Sbjct:  373 ERLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGFTWKLPENE 506          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.831e-23
Identity = 53/152 (34.87%), Postives = 88/152 (57.89%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF-ATPSNEPVDMGEALGLSIQKARPL 457
            R V ESD+ NL Y++A +KEA RL+P +P ++PH S  +  + GY +P  + ++I+   + R+P VW++P KF PER L+ +  +D+   +  ++ F +GRR C GV     +    LA L+ GF +   P    +D+ E+    +  A+PL
Sbjct:  364 RLVIESDLPNLNYVKACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKIDISESKN-DLFMAKPL 514          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 3.698e-23
Identity = 52/143 (36.36%), Postives = 85/143 (59.44%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFL-TRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN-EPVDMGEA 424
            +R V ESDI  L Y++A ++EA RL+P +P ++PH ++ + TI+GY VP  + ++++   L R+PRVW+EP +F P+R L T   D+ +   +   + F +GRR C   S    +       LL GF ++ P+  E VD+ E+
Sbjct:  388 ERLVQESDIPKLNYVKACIREAFRLHPVAPFNVPHVALADTTIAGYRVPKGSHVILSRTGLGRNPRVWDEPLRFYPDRHLATAASDVALTENDLRFISFSTGRRGCIAASLGTAMSVMLFGRLLQGFTWSKPAGVEAVDLSES 530          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 6.307e-23
Identity = 55/154 (35.71%), Postives = 89/154 (57.79%), Query Frame = 2
Query:   11 VNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFAT---PSN-EPVDMGEALGLSIQKARPL 457
            V+  +++N+ YL+A++KE +RL+P  PL +P    E+  + GY++   TQ++IN W +QRD   W  +  +F+PER        D  G+NF+ +PFG+GRR CPG+     +   TLA L+  FD+     PS  +  D+ E  G+ + +  PL
Sbjct:  339 VSGKEVENMNYLKAVIKEVLRLHPPLPLLVPRLLSEDVKLKGYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHF--DSTWDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVEDGPSGYDKPDLVEGAGIDVCRKFPL 490          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 8.238e-23
Identity = 57/154 (37.01%), Postives = 84/154 (54.55%), Query Frame = 2
Query:   17 ESDIKNLVYLQAILKEAMRLYPASPL----SIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRH--KDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN-EPVDMGEALGLSIQKARPL 457
            ++D+  + YLQA++KE +R +P  PL     +    +  C  +G  VP  T  ++N+W +  D  VW +P  F PERFL      D+DVRG +  L PFG+GRR CPG +  L  +   +A L+H F +A P     V + E L LS++   PL
Sbjct:  387 DADVARMPYLQAVVKETLRAHPPGPLLSWARLATADVPLC--NGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPL 538          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.088e-22
Identity = 44/134 (32.84%), Postives = 81/134 (60.45%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE 403
            +R V ESDI  L Y++AI++EA RL+P +  ++PH ++ + T++GY++P  +Q++++ + L R+P+VW +P  F+PER L    ++ +   +   + F +G+R C   +    +    LA LL GF +    +E
Sbjct:  375 ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE 508          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.904e-21
Identity = 52/151 (34.44%), Postives = 84/151 (55.63%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSIQKARPL 457
            R + E D+  L YLQ+++KE +RL+P  PL +       C + G+ +   T LV+N + + RDP  WE+P +F+PERFL + ++     +  + + FGSGRR CPG + A   +   +  ++  FD +    + V M E  GL++  A PL
Sbjct:  346 RLIQEKDLPKLPYLQSVVKEGLRLHPPLPLMV-RTFQRSCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFLRQEEE----RRALKHIAFGSGRRGCPGSNLATIFIGTAIGTMVQCFDLSI-KGDKVKMDEVGGLNLTMAHPL 490          
The following BLAST results are available for this feature:
BLAST of CX308650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
C89A2_ARATH2.561e-2432.89Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
C79B1_SINAL9.731e-2435.07Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
C78AB_ORYSJ1.271e-2336.60Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C79B2_ARATH2.831e-2335.07Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C79A2_ARATH2.831e-2334.87Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C79A1_SORBI3.698e-2336.36Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C71AG_ARATH6.307e-2335.71Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C78A1_MAIZE8.238e-2337.01Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C79B3_ARATH4.088e-2232.84Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C75AK_ARATH5.904e-2134.44Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC21002C11Rv AbsLeaSub1 Citrus clementina cDNA clone C21002C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308650 ID=CX308650; Name=CX308650; organism=Citrus clementina; type=EST; length=459bp
GAAAAGGCAAGTGAATGAGTCAGATATAAAGAATTTAGTTTACTTGCAAG
CCATTCTCAAAGAAGCAATGCGTTTGTATCCTGCTTCGCCACTCTCAATT
CCACACAAGTCTATAGAAGAGTGCACGATTAGTGGTTATAATGTCCCTAC
CAGCACACAACTTGTTATCAATGTTTGGAAGCTTCAACGTGATCCACGTG
TCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACAAGGCAC
AAGGATATTGACGTCAGAGGACAAAATTTTGAATTGTTACCTTTTGGTAG
TGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTATGGAAT
TTACACTTGCTGCTTTACTTCATGGCTTTGATTTTGCAACCCCATCAAAT
GAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAAAGCTAG
ACCACTTGA
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