CX308650

Overview
NameCX308650
Unique NameCX308650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C13A5_CAEEL (Putative cytochrome P450 CYP13A5 OS=Caenorhabditis elegans GN=cyp-13A5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.557e-13
Identity = 39/137 (28.47%), Postives = 71/137 (51.82%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDM 415
            +V    I  L Y++ ++KEA+R+YP + +    K ++E  + G  +   T + ++ W L  DP+VW E+  +F+PER+ +  +    +G     LPFG G R C G+  A+   +  L  +L  + F T +   + +
Sbjct:  364 EVTFDQISKLKYMECVVKEALRMYPLASIVHNRKCMKETNVLGVQIEKGTNVQVDTWTLHYDPKVWGEDANEFRPERWESGDELFYAKG---GYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFETSTQTEIPL 497          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: ORDA_ASPFN (O-methylsterigmatocystin oxidoreductase OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=ordA PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.034e-13
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 2
Query:   35 LVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPG 322
            L ++ A++KE  R +PASPL  PH + E+    GY +P    L+ N+W    DP V+ +P  F+PERFL   KD        + + FG GRR CPG
Sbjct:  349 LPFIDALVKEVFRWHPASPLGAPHITQEDQIWDGYLLPKGALLLPNIWTFTHDPSVYHDPMVFKPERFL-EGKDSPPETDPMKFV-FGFGRRICPG 442          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: ORDA_ASPFL (O-methylsterigmatocystin oxidoreductase OS=Aspergillus flavus GN=ordA PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.034e-13
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 2
Query:   35 LVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPG 322
            L ++ A++KE  R +PASPL  PH + E+    GY +P    L+ N+W    DP V+ +P  F+PERFL   KD        + + FG GRR CPG
Sbjct:  349 LPFIDALVKEVFRWHPASPLGAPHITQEDQIWDGYLLPKGALLLPNIWTFTHDPSVYHDPMVFKPERFL-EGKDSPPETDPMKFV-FGFGRRICPG 442          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.034e-13
Identity = 46/153 (30.07%), Postives = 74/153 (48.37%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHK-DIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSIQKARPL 457
            K + +   +  + YL  +L E +RLYP     +     ++  + G  VP  + +++ V+ L  DP+ W EP KF+PERF   +K  ID     +  LPFG+G R C G+ FAL  M+  L  +L  F         + M  +    +Q  +P+
Sbjct:  340 KARPSYDKVMEMEYLDMVLNETLRLYPIGS-RLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYWPEPEKFRPERFSKENKGSID----PYIFLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSLQPCKETQIPMKLSRKAMLQPEKPI 487          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: CP3AE_CAVPO (Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.034e-13
Identity = 45/140 (32.14%), Postives = 73/140 (52.14%), Query Frame = 2
Query:   41 YLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKD-IDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSIQKARPL 457
            YL  ++ E +RLYP +   I   S ++  I+G + P  T ++I  + L RD + W EP +F+PERF  ++K+ ID     +  +PFG+G R C G+  AL  ++  L  LL  F F       + +       +Q A+P+
Sbjct:  355 YLDMVVNETLRLYPVTN-RIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPDEFRPERFSKKNKENID----PYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSFYPCKETQIPLRLGSEALLQPAKPI 489          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C5133_DICDI (Probable cytochrome P450 513A3 OS=Dictyostelium discoideum GN=cyp513a3 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.034e-13
Identity = 40/122 (32.79%), Postives = 63/122 (51.64%), Query Frame = 2
Query:   35 LVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN 400
            L Y+  I+KE  R +P + L +PH + E+  I GY +   T ++ N++   R  ++++ P +F PERF           QN  L+ FG G R C G S A   +   +A LL+ + F  P+N
Sbjct:  351 LPYISMIIKETFRKHPIALLGLPHVTTEDVEIDGYKIEAGTYIIQNIFSSHRSDKIFQSPNEFIPERFFE-------SSQNQGLIHFGLGVRDCVGKSLAECEIFTLIATLLNRYQFINPNN 465          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C13A4_CAEEL (Putative cytochrome P450 CYP13A4 OS=Caenorhabditis elegans GN=cyp-13A4 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.034e-13
Identity = 39/137 (28.47%), Postives = 71/137 (51.82%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDM 415
            +V    I  L Y++ ++KEA+R+YP + L    K +++  + G  +   T + ++ W L  DP+VW ++  +F+PER+ T  +    +G     LPFG G R C G+  A+   +  L  +L  + F T +   + +
Sbjct:  364 EVTFDQISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLGVEIDEGTNVQVDTWTLHYDPKVWGDDASEFKPERWETGDELFYAKG---GYLPFGMGPRICIGMRLAMMEEKLLLTHILKKYTFDTSTETEIPL 497          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: THAS_MACFA (Thromboxane-A synthase OS=Macaca fascicularis GN=TBXAS1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13
Identity = 39/119 (32.77%), Postives = 60/119 (50.42%), Query Frame = 2
Query:   29 KNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF 385
            + L YL  ++ E +R+YP +      ++ ++C + G  +P    L + V  L  DP  W  P  F PERF     +   + + F  LPFG+G R+C GV   L  ++ TL  +LH F F
Sbjct:  388 EGLPYLDMVIAETLRMYPPA-FRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSPETFNPERFTA---EAQQQHRPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFQF 502          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: ORDA_ASPPA (O-methylsterigmatocystin oxidoreductase OS=Aspergillus parasiticus GN=ordA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13
Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 2
Query:   35 LVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKD-IDVRGQNFELLPFGSGRRACPG 322
            L ++ A++KE  R +PASPL  PH + E+    GY +P    L+ N+W    DP V+ +P  F+PERFL R     +     F    FG GRR CPG
Sbjct:  349 LPFIDALVKEVFRWHPASPLGAPHITQEDQIWDGYLLPKGALLLPNIWTFTHDPSVYHDPMVFKPERFLERQSSPPETDPMKF---VFGFGRRICPG 442          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13
Identity = 43/145 (29.66%), Postives = 73/145 (50.34%), Query Frame = 2
Query:   26 IKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKD-IDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSIQKARPL 457
            +  + YL  ++ E +R++P + + +     ++  I+G  +P    ++I  + L  DP+ W EP KF PERF  ++ D ID     +   PFGSG R C G+ FAL  M+  +  +L  F F       + +   LG  +Q  +P+
Sbjct:  350 VLQMEYLDMVVNETLRIFPIA-MRLERVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYWPEPEKFLPERFSKKNNDNID----PYIYTPFGSGPRNCIGMRFALMNMKLAIIRVLQNFSFKPCKETQIPLKLRLGGLLQTEKPI 489          
The following BLAST results are available for this feature:
BLAST of CX308650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
C13A5_CAEEL1.557e-1328.47Putative cytochrome P450 CYP13A5 OS=Caenorhabditis... [more]
ORDA_ASPFN2.034e-1340.63O-methylsterigmatocystin oxidoreductase OS=Aspergi... [more]
ORDA_ASPFL2.034e-1340.63O-methylsterigmatocystin oxidoreductase OS=Aspergi... [more]
CP3AV_MESAU2.034e-1330.07Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP3AE_CAVPO2.034e-1332.14Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14... [more]
C5133_DICDI2.034e-1332.79Probable cytochrome P450 513A3 OS=Dictyostelium di... [more]
C13A4_CAEEL2.034e-1328.47Putative cytochrome P450 CYP13A4 OS=Caenorhabditis... [more]
THAS_MACFA2.656e-1332.77Thromboxane-A synthase OS=Macaca fascicularis GN=T... [more]
ORDA_ASPPA2.656e-1340.21O-methylsterigmatocystin oxidoreductase OS=Aspergi... [more]
CP3A8_MACFA2.656e-1329.66Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]

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Properties
Property NameValue
Genbank descriptionC21002C11Rv AbsLeaSub1 Citrus clementina cDNA clone C21002C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308650 ID=CX308650; Name=CX308650; organism=Citrus clementina; type=EST; length=459bp
GAAAAGGCAAGTGAATGAGTCAGATATAAAGAATTTAGTTTACTTGCAAG
CCATTCTCAAAGAAGCAATGCGTTTGTATCCTGCTTCGCCACTCTCAATT
CCACACAAGTCTATAGAAGAGTGCACGATTAGTGGTTATAATGTCCCTAC
CAGCACACAACTTGTTATCAATGTTTGGAAGCTTCAACGTGATCCACGTG
TCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACAAGGCAC
AAGGATATTGACGTCAGAGGACAAAATTTTGAATTGTTACCTTTTGGTAG
TGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTATGGAAT
TTACACTTGCTGCTTTACTTCATGGCTTTGATTTTGCAACCCCATCAAAT
GAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAAAGCTAG
ACCACTTGA
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