CX308650

Overview
NameCX308650
Unique NameCX308650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig951 contig Ccv1_Contig951:1..459. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 7.693e-29
Identity = 50/132 (37.88%), Postives = 85/132 (64.39%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE 403
            Q+ E D++NL YLQA++KE +RL  A PL +PH ++ +  + G+++P  +++++N W L  +P  W++P +F+PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  T+  L+  F+   P  +
Sbjct:  345 QITEPDVQNLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQ 476          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 7.693e-29
Identity = 52/132 (39.39%), Postives = 83/132 (62.88%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE 403
            QV E D++ L YLQA++KE +RL  A PL +PH ++ +  + GY++P  +++++N W L  +P  W+ P +F+PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  TL  L+  F+   P  +
Sbjct:  345 QVTEPDMQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQ 476          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.005e-28
Identity = 55/142 (38.73%), Postives = 87/142 (61.27%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFD-FATPSNEPVDMGEALG 430
            QV E D+  L YLQA++KE +RL  A PL +PH ++ +  + GY++P  +++++N W L  +P  W++P +F+PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  T+  L+  F+    P  + VD  E  G
Sbjct:  345 QVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVDTTEKGG 486          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.312e-28
Identity = 61/155 (39.35%), Postives = 96/155 (61.94%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            K  + E+D++ L YL++++KE +RL+P S L IP + I    I GY +P  T+++IN W + RDP+ W +  +F PERF      ID +G +FE +PFG+GRR CPG++F L  +   LA LL+ F++  P+    E +DM E  G+++ +   L
Sbjct:  343 KEIIRETDLEELSYLKSVIKETLRLHPPSQL-IPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERF--NDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKL 494          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.312e-28
Identity = 60/155 (38.71%), Postives = 97/155 (62.58%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP---SNEPVDMGEALGLSIQKARPL 457
            K ++ E D++ + YL+ +++E  RL+P +PL +P +++ +  I GYN+P +T + IN + + RDP  W  P +F PERF+     ID +GQ+FELLPFG GRR CPG++  + ++E  L  +L+ FD++ P   +   ++M EA    I K  PL
Sbjct:  339 KEKITEQDLEKVHYLKLVIQETFRLHPPAPLLLPRETMSDVKIQGYNIPKNTMIEINTYAIGRDPNCWTNPNEFIPERFV--DSPIDYKGQHFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSLPYGMAIADINMEEAGAFVIAKKVPL 491          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.312e-28
Identity = 56/143 (39.16%), Postives = 97/143 (67.83%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP---SNEPVDMGE 421
            K ++ E D++ + YL+ +++EA RL+P +PL +P  ++ +  I GY++P +T + IN + + RDP+ W +P +F PERF+     I+ +GQ+FELLPFG+GRR CPG++  + ++E  L +LL+ FD++ P   + + +DM E
Sbjct:  337 KEKITEEDLEKVEYLKMVIEEAFRLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFV--DNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEE 477          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.312e-28
Identity = 58/153 (37.91%), Postives = 98/153 (64.05%), Query Frame = 2
Query:   11 VNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF---ATPSNEPVDMGEALGLSIQKARPL 457
            + E +++N+ YL+A++KE +RL+P+ P+ +P    E+  + GYN+   T+++IN W +QRD  +W  +  +F+PER L     +D  G+N   +PFGSGRR CPG++ AL + E T+A L+  FD+   A P+ +  D+ EA+G+ + +  PL
Sbjct:  339 IKEKEVENMKYLKAVIKEVLRLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHL--DSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAGPNGDQPDLTEAIGIDVCRKFPL 489          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.714e-28
Identity = 55/142 (38.73%), Postives = 87/142 (61.27%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALG 430
            QV E DI+ L YLQA++KE +RL  A PL +PH ++ +  + GY++P  +++++N W L  +P  W++P +F+PERF      ++  G +F  LPFG GRR+CPG+  AL ++  TL  L+  F+   P  +  +D  E  G
Sbjct:  346 QVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGG 487          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.714e-28
Identity = 59/154 (38.31%), Postives = 91/154 (59.09%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQN---FELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSIQKARPL 457
            R ++ESDI  L YLQ ++ E  RL+P +P  IP    ++  I GY+VP  T +++N W + RDP +WEEP KF P+R+       D  G +   ++L+PFG+GRR CPG     +++   L +L+  F++     E +DM E+ GL ++K  PL
Sbjct:  338 RLIDESDIAVLPYLQNVVSETFRLFPVAPFLIPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRY------NDGCGSDYYVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWENVKGEEMDMSESTGLGMRKMDPL 485          
BLAST of CX308650 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.714e-28
Identity = 53/134 (39.55%), Postives = 87/134 (64.93%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE 403
            K ++ E D+  L Y + ++KE +RL+P +PL +P +++    I GY+VP  TQ+++NV+ + RDP++WE   +F P+RFL     +D +G+N+E +PFGSGRR CPG++    ++E  L  LL+ FD+     E
Sbjct:  338 KERIKEEDLNQLHYFKLVVKETLRLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFL--DSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGLAKQE 469          
The following BLAST results are available for this feature:
BLAST of CX308650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
TCMO_HELTU7.693e-2937.88Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_GLYEC7.693e-2939.39Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_ZINEL1.005e-2838.73Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
C71D8_SOYBN1.312e-2839.35Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71BL_ARATH1.312e-2838.71Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH1.312e-2839.16Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AD_ARATH1.312e-2837.91Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN1.714e-2838.73Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C81F1_ARATH1.714e-2838.31Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71BF_ARATH1.714e-2839.55Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC21002C11Rv AbsLeaSub1 Citrus clementina cDNA clone C21002C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308650 ID=CX308650; Name=CX308650; organism=Citrus clementina; type=EST; length=459bp
GAAAAGGCAAGTGAATGAGTCAGATATAAAGAATTTAGTTTACTTGCAAG
CCATTCTCAAAGAAGCAATGCGTTTGTATCCTGCTTCGCCACTCTCAATT
CCACACAAGTCTATAGAAGAGTGCACGATTAGTGGTTATAATGTCCCTAC
CAGCACACAACTTGTTATCAATGTTTGGAAGCTTCAACGTGATCCACGTG
TCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACAAGGCAC
AAGGATATTGACGTCAGAGGACAAAATTTTGAATTGTTACCTTTTGGTAG
TGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTATGGAAT
TTACACTTGCTGCTTTACTTCATGGCTTTGATTTTGCAACCCCATCAAAT
GAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAAAGCTAG
ACCACTTGA
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