CX308672

Overview
NameCX308672
Unique NameCX308672
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length376
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308672 vs. ExPASy Swiss-Prot
Match: DGKH_DROER (Diacylglycerol kinase eta OS=Drosophila erecta GN=GG14241 PE=3 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.604e-11
Identity = 29/71 (40.85%), Postives = 47/71 (66.20%), Query Frame = -2
Query:   13 LNNYLGVGCDAKVALDIHNLREENPEKFYNQFMNKVLYAREGAKSIMDRTFEDFPWQVRVVVDGTEIEVPE 225
            +NNY G+G DAK++LD HN REE+PEK  ++  N + Y   G+K ++ +T ++   +V++  DG  I +PE
Sbjct: 1460 MNNYFGIGIDAKISLDFHNKREEHPEKCRSRARNYMWYGVLGSKQLLQKTCKNLEQRVQLECDGQRIPLPE 1530          
BLAST of CX308672 vs. ExPASy Swiss-Prot
Match: DGKH_DROAN (Diacylglycerol kinase eta OS=Drosophila ananassae GN=GF18176 PE=3 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.604e-11
Identity = 29/71 (40.85%), Postives = 47/71 (66.20%), Query Frame = -2
Query:   13 LNNYLGVGCDAKVALDIHNLREENPEKFYNQFMNKVLYAREGAKSIMDRTFEDFPWQVRVVVDGTEIEVPE 225
            +NNY G+G DAK++LD HN REE+PEK  ++  N + Y   G+K ++ +T ++   +V++  DG  I +PE
Sbjct: 1458 MNNYFGIGIDAKISLDFHNKREEHPEKCRSRARNYMWYGVLGSKQLLQKTCKNLEQRVQLECDGQRIPLPE 1528          
BLAST of CX308672 vs. ExPASy Swiss-Prot
Match: DGKG_HUMAN (Diacylglycerol kinase gamma OS=Homo sapiens GN=DGKG PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.604e-11
Identity = 36/122 (29.51%), Postives = 62/122 (50.82%), Query Frame = -2
Query:   19 WGGGLSSVERNGGLCTMLQHIEHAAVTILDRWKVAILNQQ----GKLLEPPKFLNNYLGVGCDAKVALDIHNLREENPEKFYNQFMNKVLYAREGAKSIMDRTFEDFPWQVRVVVDGTEIEV 372
            WGGG       G L  +L+ IE + + +LDRW + ++ ++    G  + P   +NNY  +G DA +A   H +RE++PEKF ++  NK+ Y   G       T +     + +  DG  +++
Sbjct:  531 WGGGYEG----GSLTKILKDIEQSPLVMLDRWHLEVIPREEVENGDQV-PYSIMNNYFSIGVDASIAHRFHVMREKHPEKFNSRMKNKLWYFEFGTSETFAATCKKLHDHIELECDGVGVDL 647          
The following BLAST results are available for this feature:
BLAST of CX308672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
DGKH_DROER7.604e-1140.85Diacylglycerol kinase eta OS=Drosophila erecta GN=... [more]
DGKH_DROAN7.604e-1140.85Diacylglycerol kinase eta OS=Drosophila ananassae ... [more]
DGKG_HUMAN7.604e-1129.51Diacylglycerol kinase gamma OS=Homo sapiens GN=DGK... [more]

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Properties
Property NameValue
Genbank descriptionC21002E09Rv AbsLeaSub1 Citrus clementina cDNA clone C21002E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308672 ID=CX308672; Name=CX308672; organism=Citrus clementina; type=EST; length=376bp
ACCTTCTGCATCCTCAGGGACTTCTATCTCAGTGCCATCCACAACAACTC
TAACTTGCCAAGGAAAATCTTCAAATGTCCTGTCCATTATACTCTTTGCA
CCTTCTCTTGCATACAAAACTTTATTCATGAACTGATTATAAAACTTCTC
TGGATTCTCCTCCCGCAGGTTGTGAATGTCCAGGGCAACCTTTGCATCAC
AACCAACTCCAAGATAGTTGTTCAAAAATTTTGGTGGCTCGAGTAGCTTC
CCTTGTTGATTCAAAATTGCTACCTTCCACCGATCAAGTATGGTTACTGC
AGCATGTTCTATGTGCTGTAACATTGTGCAAAGGCCTCCATTTCTTTCCA
CGGAACTCAGCCCTCCTCCCCAAAAC
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