CX308743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB2_YEAST (Thioredoxin reductase 2, mitochondrial OS=Saccharomyces cerevisiae GN=TRR2 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.016e-23 Identity = 60/116 (51.72%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 4 SKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQD 351 SKVYI+ R+D FRAS IMQ R NP I V++N+V LEA G+ + +DL+V+GLF+AIGH PAT + GQ+D GYI T PG++ TSVPG FAAGDVQD Sbjct: 201 SKVYILVRKDHFRASVIMQRRIEKNPNIIVLFNTVALEAKGDGKLLNMLRIKNTK--SNVENDLEVNGLFYAIGHSPATDIVKGQVDEEETGYIKTVPGSSLTSVPGFFAAGDVQD 314
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_DICDI (Thioredoxin reductase OS=Dictyostelium discoideum GN=trrA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.860e-23 Identity = 56/117 (47.86%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 4 SKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 SKV ++ RR+ RASK MQ + +NPKI+V+W++ ++E GE T S+L GLF+AIGH P + FL+GQL+ GYIIT+PG+T T+V GVFA GDVQDK Sbjct: 180 SKVTLLVRRNVMRASKAMQQKVFSNPKIEVLWDTTLVEIKGEKSVTSVGIYNSE---TKVSSNLDAQGLFYAIGHTPNSAFLNGQLNTDETGYIITQPGSTKTNVEGVFACGDVQDK 293
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_STRCO (Thioredoxin reductase OS=Streptomyces coelicolor GN=trxB PE=3 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 1.467e-22 Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 10 VYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQD 351 V I+HRRD+ RASK MQ RA +PKI +W+S V E G+ TG++SDL V+GLF AIGH+P T+ GQLDL +GY+ +T T++ GVF AGDV D Sbjct: 172 VTIVHRRDTLRASKAMQERAFADPKISFVWDSEVAEVQGDQKLAGLKLRNVK---TGELSDLPVTGLFIAIGHDPRTELFKGQLDLDPEGYLKVDAPSTRTNLTGVFGAGDVVD 282
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_STRCL (Thioredoxin reductase OS=Streptomyces clavuligerus GN=trxB PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 7.279e-22 Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 10 VYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQD 351 V I+HRRDS RASK MQ+RA +PKI WNS V +GE TG+ +L +GLF A+GH+P T+ GQLDL +GY+ +T T++ GVFAAGDV D Sbjct: 172 VTIVHRRDSLRASKAMQDRAFADPKISFAWNSEVATIHGEQKLTGLTLRDTK---TGETRELAATGLFIAVGHDPRTELFKGQLDLDDEGYLKVASPSTRTNLTGVFAAGDVVD 282
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_PENCH (Thioredoxin reductase OS=Penicillium chrysogenum GN=TRR1 PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 9.507e-22 Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 1 GSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDL-KVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 GS V ++ R+D RAS IM +R L +PK V +N+V E GE ++ + +GLF+A+GH+PA+ + GQ++L +GYIITKPGT+ T+V GVFA GDVQDK Sbjct: 180 GSSVTVLVRKDKLRASNIMADRLLAHPKCKVRFNTVATEVIGENKPNGLMTHLRVKDVLSNAEEVVEANGLFYAVGHDPASGLVKGQVELDDEGYIITKPGTSFTNVEGVFACGDVQDK 298
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_SPIBA (Thioredoxin reductase (Fragment) OS=Spironucleus barkhanus GN=TRXB PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.242e-21 Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1 Query: 4 SKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQD 351 SKVY+I RRD+FRAS M R +NPKI++I+NS V E GE +G ++ LKV LF+ IGH P T+ L GQ+ + +GYI+ + T +T+VPG+FAAGD D Sbjct: 163 SKVYLILRRDAFRASAAMVQRVKSNPKIEIIYNSAVQEIKGETRVNQILVKNLK---SGDITPLKVEALFWCIGHTPQTRLLKGQVKMSENGYILVENQTQYTNVPGIFAAGDCCD 275
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_MYCSM (Thioredoxin reductase OS=Mycobacterium smegmatis GN=trxB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.285e-18 Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 10 VYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQD 351 V +IHRRD FRASKIM RA N KI + N+ + + G+ TG+ S L V+G+F AIGH+P ++ + GQ++L +GY+ + TT+TS+ GVFAAGD+ D Sbjct: 173 VTLIHRRDEFRASKIMLERARANEKITFLTNTEITQIEGDPKVTGVRLRDTV---TGEESKLDVTGVFVAIGHDPRSELVRGQVELDDEGYVKVQGRTTYTSLDGVFAAGDLVD 283
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_MYCLE (Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium leprae GN=trxB/A PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.192e-18 Identity = 50/115 (43.48%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 10 VYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 V ++HRRD FRASKIM RA N KI I N V+ G TG+ + L V+G+F AIGHEP + + +D+ DGY++ K TT TS+ GVFAAGD+ D+ Sbjct: 178 VTLVHRRDEFRASKIMLGRARNNDKIKFITNHTVVAVNG---YTTVTGLRLRNTTTGEETTLVVTGVFVAIGHEPRSSLVSDVVDIDPDGYVLVKGRTTSTSMDGVFAAGDLVDR 289
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_MYCTU (Thioredoxin reductase OS=Mycobacterium tuberculosis GN=trxB PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.738e-18 Identity = 49/115 (42.61%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 10 VYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 V ++HRRD FRASKIM +RA N KI + N V+ G+ TG + L V+G+F AIGHEP + + +D+ DGY++ + TT TS+PGVFAAGD+ D+ Sbjct: 181 VTLVHRRDEFRASKIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTN---TGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDR 292
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_HAEIN (Thioredoxin reductase OS=Haemophilus influenzae GN=trxB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.268e-15 Identity = 53/123 (43.09%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 4 SKVYIIHRRDSFRASKIMQNRA---LTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQD 351 S V++IHRRDSFRA KI+ +R + KI + + + E G+ TG+ +LK+ GLF AIGH P T+ GQL+L ++GYI+ K G T TSV GVFAAGDV D Sbjct: 170 STVHLIHRRDSFRAEKILIDRLYKKVEEGKIVLHTDRTLDEVLGDNMGVTGLRLANTK--TGEKEELKLDGLFVAIGHSPNTEIFQGQLEL-NNGYIVVKSGLDGNATATSVEGVFAAGDVMD 289 The following BLAST results are available for this feature:
BLAST of CX308743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308743 ID=CX308743; Name=CX308743; organism=Citrus clementina; type=EST; length=355bpback to top |