CX308743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_STAAM (Thioredoxin reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=trxB PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.772e-13 Identity = 52/118 (44.07%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPAT-KFLDGQLDLHSD-GYIITKPGTTHTSVPGVFAAGDVQDK 354 KV I+HRRD RA +I+Q+RA N KID IW S L++ E G + G+F IG +P T F D L + +D GYI+TK T TSVPG+FAAGDV+DK Sbjct: 169 KVTIVHRRDELRAQRILQDRAFKNDKIDFIW-SHTLKSINE-KDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKD--LGITNDVGYIVTKDDMT-TSVPGIFAAGDVRDK 281
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_STAAC (Thioredoxin reductase OS=Staphylococcus aureus (strain COL) GN=trxB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.772e-13 Identity = 52/118 (44.07%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPAT-KFLDGQLDLHSD-GYIITKPGTTHTSVPGVFAAGDVQDK 354 KV I+HRRD RA +I+Q+RA N KID IW S L++ E G + G+F IG +P T F D L + +D GYI+TK T TSVPG+FAAGDV+DK Sbjct: 169 KVTIVHRRDELRAQRILQDRAFKNDKIDFIW-SHTLKSINE-KDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKD--LGITNDVGYIVTKDDMT-TSVPGIFAAGDVRDK 281
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_LISIN (Thioredoxin reductase OS=Listeria innocua GN=trxB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.772e-13 Identity = 44/116 (37.93%), Postives = 61/116 (52.59%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 KV I+HRRD RA +I+Q+RA + K+D IWN+ V E G+ G S + V G+F +G P TK +GYI+T T++PG+FAAGDV+ K Sbjct: 171 KVTIVHRRDKLRAQQILQDRAFKDEKVDFIWNNTVEEIIGD--GKKVTSVKLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLSLGITDEEGYIVTDE-EMRTNLPGIFAAGDVRAK 283
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_VIBCH (Thioredoxin reductase OS=Vibrio cholerae GN=trxB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.621e-13 Identity = 45/123 (36.59%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 4 SKVYIIHRRDSFRASKIMQNRAL---TNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQD 351 S+V+++HRRDSFR+ KI+ +R + N I + + + E G+ + +L V G+F AIGH+P ++ +GQL++ +GYI+ K G T TS+ GVFAAGDV D Sbjct: 170 SEVHLVHRRDSFRSEKILIDRLMDKVANGNIVLHTHRTLDEVLGDEMGVTGVRLKDTQ--SDMTENLDVMGVFIAIGHQPNSQIFEGQLEM-KNGYIVVKSGLEGNATQTSIEGVFAAGDVMD 289
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_STAAR (Thioredoxin reductase OS=Staphylococcus aureus (strain MRSA252) GN=trxB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.067e-13 Identity = 51/118 (43.22%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPAT-KFLDGQLDLHSD-GYIITKPGTTHTSVPGVFAAGDVQDK 354 KV I+HRRD RA +I+Q+RA N KID IW S L++ E G + G+F IG +P T F D L + +D GYI+TK T TS PG+FAAGDV+DK Sbjct: 169 KVTIVHRRDELRAQRILQDRAFKNDKIDFIW-SHTLKSINE-KDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKD--LGITNDVGYIVTKDDMT-TSAPGIFAAGDVRDK 281
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_CLOLI (Thioredoxin reductase OS=Clostridium litorale GN=trxB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.067e-13 Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVS------GLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 KV I+HRR RA+K +Q +A N K++ +WN+V+ E G+ TG+V++ G+F IG++P + ++G+L+L GYI T T+V GVFAAGD++ K Sbjct: 169 KVTIVHRRAELRAAKSIQEKAFKNEKLNFMWNTVIEEIKGD---GIVESAVFKNRETGEVTEFVAPEEDGTFGIFVFIGYDPKSALVEGKLELDETGYIPT-DDNMKTNVEGVFAAGDIRVK 286
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_BUCAP (Thioredoxin reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=trxB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.376e-12 Identity = 47/122 (38.52%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRAL---TNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGT----THTSVPGVFAAGDVQD 351 K+Y+IHRR++F+A KI+ +R L K+ + NS + + G + + VSGLF AIG+ P T QL + DGYI K GT T T++PGVFAAGDV D Sbjct: 171 KIYLIHRRNNFKAEKILIDRLLKIVKTKKVILHLNSTIEDILGNNKGVTHLLIKNKNLKEKKKLKIAVSGLFVAIGYIPNTDIFTDQLKM-KDGYIKIKKGTHGNYTQTNIPGVFAAGDVID 291
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_TREPA (Thioredoxin reductase OS=Treponema pallidum GN=trxB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.829e-12 Identity = 47/117 (40.17%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFL-DGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 +V +IHRRD+ RA K + R L NP I V WN+ + GE TG+ +L +FF IG P T L D + D S GYI+T TSV G+FAAGDV+ K Sbjct: 169 RVTMIHRRDTLRAQKAIAERTLKNPHIAVQWNTTLEAVRGE---TKVSSVLLKDVKTGETRELACDAVFFFIGMVPITGLLPDAEKD--STGYIVT-DDEMRTSVEGIFAAGDVRAK 279
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_BUCBP (Thioredoxin reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trxB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 45/121 (37.19%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNS--VVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQD 351 KVY+IHRR +F A KI+ +R L K ++I + +V + G + + +SG+F AIGH P TK QL + +D YI+ K G T T++PG+FAAGDV D Sbjct: 176 KVYLIHRRKTFSAEKILISRMLNKTKKNIILRTGCIVNKIIGGVNGVRGVQITCNDSKENKCL-INLSGVFIAIGHAPNTKLFKNQLFMKND-YILVKSGIHGNVTQTNIPGIFAAGDVID 294
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_BUCAI (Thioredoxin reductase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trxB PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.426e-11 Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRA---LTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYI-ITKP---GTTHTSVPGVFAAGDVQD 351 KV++IHR +FRA KI+ +R + + KI + NS+V G S ++VSGLF AIG+ P T +L + DGYI +T+ T TS+PG+FAAGDV D Sbjct: 171 KVHLIHRGINFRAEKILLDRLEKKIKSQKIIIYLNSIVKNILGNSSGVTALLIEQKNSKEKTESKIQVSGLFVAIGYTPNTNIFVNKLKM-KDGYIQVTRQEHGNYTQTSIPGIFAAGDVID 291 The following BLAST results are available for this feature:
BLAST of CX308743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308743 ID=CX308743; Name=CX308743; organism=Citrus clementina; type=EST; length=355bpback to top |