CX308748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: IF4A_NEUCR (ATP-dependent RNA helicase eIF4A OS=Neurospora crassa GN=tif-1 PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25 Identity = 58/154 (37.66%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 6 YIKLSELE-KNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 464 YI + + E K L+DL + + Q VIF + + L L +F +H M Q +R K F+ G+ R+L+ATDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV +A D ++ +++ + I+E+P + Sbjct: 241 YIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFV-TADDVRMMREIEQFYSTQIEEMPMNV 393
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: IF4A_MAGGR (ATP-dependent RNA helicase eIF4A OS=Magnaporthe grisea GN=TIF1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25 Identity = 58/154 (37.66%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 6 YIKLSELE-KNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 464 YI + + E K L+DL + + Q VIF + + L L +F +H M Q +R K F+ G+ R+L+ATDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV +A D ++ +++ + I+E+P + Sbjct: 240 YIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFV-TADDVRMMREIEQFYSTQIEEMPMNV 392
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25 Identity = 58/154 (37.66%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 6 YIKLSELE-KNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 464 YI + + E K L+DL + + Q VIF + + L L +F +H M Q +R K F+ G+ R+L+ATDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV +A D ++ +++ + I+E+P + Sbjct: 242 YIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQGQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFV-TADDVRMMREIEQFYSTQIEEMPMNV 394
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: FAL1_CRYNE (ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans GN=FAL1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25 Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 42 LNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 464 L DL D L Q VIF + + L + + E NF +H M Q+ER F+ G R+L+ TD+ RGID+++V++VINYD+P S + YLHR+GR+GRFG KG+AI FV + D IL ++ + I E+P + Sbjct: 253 LCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKERDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKGVAINFV-TVDDVRILRDIEQYYSTQIDEMPMNV 392
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: DHH1_COCIM (ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25 Identity = 62/160 (38.75%), Postives = 91/160 (56.88%), Query Frame = 3 Query: 3 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 482 +Y + E +K LN L L NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI + + D L +++ +I+ +P ID Y+ Sbjct: 262 YYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLI-NWDDRYNLYKIEQELGTEIQPIPPSIDKKLYV 420
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: IF4A3_DANRE (Eukaryotic initiation factor 4A-III OS=Danio rerio GN=eif4a3 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24 Identity = 54/141 (38.30%), Postives = 87/141 (61.70%), Query Frame = 3 Query: 42 LNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 464 L DL D L Q VIF + + L + + E NF +H M Q+ER + K F+ G R+L++TD+ RG+D+ +V+++INYD+P++ + Y+HR+GR+GR+G KG+AI FV + D IL ++ + I E+P + Sbjct: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVSQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQYYSTQIDEMPMNV 402
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24 Identity = 57/154 (37.01%), Postives = 92/154 (59.74%), Query Frame = 3 Query: 6 YIKLSELE-KNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 464 YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P + Sbjct: 251 YINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 403
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24 Identity = 57/154 (37.01%), Postives = 92/154 (59.74%), Query Frame = 3 Query: 6 YIKLSELE-KNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 464 YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P + Sbjct: 251 YINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 403
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: IF4A2_MOUSE (Eukaryotic initiation factor 4A-II OS=Mus musculus GN=Eif4a2 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24 Identity = 57/154 (37.01%), Postives = 92/154 (59.74%), Query Frame = 3 Query: 6 YIKLSELE-KNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 464 YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P + Sbjct: 251 YINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 403
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24 Identity = 57/154 (37.01%), Postives = 92/154 (59.74%), Query Frame = 3 Query: 6 YIKLSELE-KNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 464 YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P + Sbjct: 252 YINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 404 The following BLAST results are available for this feature:
BLAST of CX308748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308748 ID=CX308748; Name=CX308748; organism=Citrus clementina; type=EST; length=702bpback to top |