CX308813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308813 vs. ExPASy Swiss-Prot
Match: RL44_ASHGO (60S ribosomal protein L44 OS=Ashbya gossypii GN=RPL44 PE=3 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 2.918e-15 Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+ +F KKAKTTKK+VLRL+C CK +Q P+KRCKHFE+GG+KK KG +L Sbjct: 52 GQTKQIFRKKAKTTKKVVLRLECLSCKTKAQLPLKRCKHFELGGEKKQKGQAL 104
BLAST of CX308813 vs. ExPASy Swiss-Prot
Match: RL44_YARLI (60S ribosomal protein L44 OS=Yarrowia lipolytica GN=RPL44 PE=3 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+ +FHKKAKTTKK+VLRL+C CK Q +KRCKHFE+GGDKK KG +L Sbjct: 52 GQTKQIFHKKAKTTKKVVLRLECVKCKVKMQLALKRCKHFELGGDKKQKGQAL 104
BLAST of CX308813 vs. ExPASy Swiss-Prot
Match: RL44_DEBOC (60S ribosomal protein L44 OS=Debaryomyces occidentalis GN=RPL44 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 4.977e-15 Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+ +FHKKAKTTKK+VL+L+C CK +Q +KRCKHFE+GGDKK KG +L Sbjct: 52 GQTKQIFHKKAKTTKKVVLKLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 104
BLAST of CX308813 vs. ExPASy Swiss-Prot
Match: RL44_CANTR (60S ribosomal protein L44 OS=Candida tropicalis GN=RPL44 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 4.977e-15 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+ VFHKKAKTTKKIVL+L+C CK Q P+KRCKH E+GG+KK KG +L Sbjct: 52 GQTKQVFHKKAKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQAL 104
BLAST of CX308813 vs. ExPASy Swiss-Prot
Match: RL44Q_CANMA (60S ribosomal protein L44 Q OS=Candida maltosa GN=RIM-C PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 4.977e-15 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+ VFHKKAKTTKKIVL+L+C CK Q P+KRCKH E+GG+KK KG +L Sbjct: 52 GQTKQVFHKKAKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQAL 104
BLAST of CX308813 vs. ExPASy Swiss-Prot
Match: RL36L_PONAB (60S ribosomal protein L36a-like OS=Pongo abelii GN=RPL36AL PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13 Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = -3 Query: 217 GQTEPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 366 GQT+P+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 50 GQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CX308813 vs. ExPASy Swiss-Prot
Match: RL36L_HUMAN (60S ribosomal protein L36a-like OS=Homo sapiens GN=RPL36AL PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13 Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = -3 Query: 217 GQTEPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 366 GQT+P+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 50 GQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CX308813 vs. ExPASy Swiss-Prot
Match: RL36A_TAKRU (60S ribosomal protein L36a OS=Takifugu rubripes GN=rpl36a PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13 Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = -3 Query: 217 GQTEPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 366 GQT+P+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 50 GQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CX308813 vs. ExPASy Swiss-Prot
Match: RL36A_RAT (60S ribosomal protein L36a OS=Rattus norvegicus GN=Rpl36a PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13 Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = -3 Query: 217 GQTEPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 366 GQT+P+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 50 GQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CX308813 vs. ExPASy Swiss-Prot
Match: RL36A_PIG (60S ribosomal protein L36a OS=Sus scrofa GN=RPL36A PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13 Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = -3 Query: 217 GQTEPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 366 GQT+P+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 50 GQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101 The following BLAST results are available for this feature:
BLAST of CX308813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308813 ID=CX308813; Name=CX308813; organism=Citrus clementina; type=EST; length=368bpback to top |