CX308827

Overview
NameCX308827
Unique NameCX308827
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length428
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308827 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.525e-14
Identity = 47/142 (33.10%), Postives = 65/142 (45.77%), Query Frame = -1
Query:   30 VVATKSPRSDKQYVWEAEADSSSYVIREETDPE-KLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTI-----------EVXXXXXXXXXXXXXXXXXXXXXXXXXXKYWDWELANETKPIWMR 419
            V+ T    +D Q++WE++++  S +     DP    L RGT ITL LKE+   ++ E   I+ LVK YSQF++FPIY W  K+ T+           E                             WDWEL N+ KPIW R
Sbjct:  209 VIVTSKHNNDTQHIWESDSNEFSVI----ADPRGNTLGRGTTITLVLKEEAS-DYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEEPMEEEEAAKEEKEESDDEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQR 345          
BLAST of CX308827 vs. ExPASy Swiss-Prot
Match: ENPL_PIG (Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 1.525e-14
Identity = 47/142 (33.10%), Postives = 65/142 (45.77%), Query Frame = -1
Query:   30 VVATKSPRSDKQYVWEAEADSSSYVIREETDPE-KLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTI-----------EVXXXXXXXXXXXXXXXXXXXXXXXXXXKYWDWELANETKPIWMR 419
            V+ T    +D Q++WE++++  S +     DP    L RGT ITL LKE+   ++ E   I+ LVK YSQF++FPIY W  K+ T+           E                             WDWEL N+ KPIW R
Sbjct:  209 VIVTSKHNNDTQHIWESDSNEFSVI----ADPRGNTLGRGTTITLVLKEEAS-DYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEEPMEEEEAAKEEKEESDDEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQR 345          
BLAST of CX308827 vs. ExPASy Swiss-Prot
Match: ENPL_MACFA (Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.525e-14
Identity = 47/142 (33.10%), Postives = 65/142 (45.77%), Query Frame = -1
Query:   30 VVATKSPRSDKQYVWEAEADSSSYVIREETDPE-KLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTI-----------EVXXXXXXXXXXXXXXXXXXXXXXXXXXKYWDWELANETKPIWMR 419
            V+ T    +D Q++WE++++  S +     DP    L RGT ITL LKE+   ++ E   I+ LVK YSQF++FPIY W  K+ T+           E                             WDWEL N+ KPIW R
Sbjct:  209 VIVTSKHNNDTQHIWESDSNEFSVI----ADPRGNTLGRGTTITLVLKEEAS-DYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEEPMEEEEAAKEEKEESDDEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQR 345          
BLAST of CX308827 vs. ExPASy Swiss-Prot
Match: ENPL_HUMAN (Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.525e-14
Identity = 47/142 (33.10%), Postives = 65/142 (45.77%), Query Frame = -1
Query:   30 VVATKSPRSDKQYVWEAEADSSSYVIREETDPE-KLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTI-----------EVXXXXXXXXXXXXXXXXXXXXXXXXXXKYWDWELANETKPIWMR 419
            V+ T    +D Q++WE++++  S +     DP    L RGT ITL LKE+   ++ E   I+ LVK YSQF++FPIY W  K+ T+           E                             WDWEL N+ KPIW R
Sbjct:  209 VIVTSKHNNDTQHIWESDSNEFSVI----ADPRGNTLGRGTTITLVLKEEAS-DYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEEPMEEEEAAKEEKEESDDEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQR 345          
BLAST of CX308827 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.525e-14
Identity = 47/142 (33.10%), Postives = 65/142 (45.77%), Query Frame = -1
Query:   30 VVATKSPRSDKQYVWEAEADSSSYVIREETDPE-KLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTI-----------EVXXXXXXXXXXXXXXXXXXXXXXXXXXKYWDWELANETKPIWMR 419
            V+ T    +D Q++WE++++  S +     DP    L RGT ITL LKE+   ++ E   I+ LVK YSQF++FPIY W  K+ T+           E                             WDWEL N+ KPIW R
Sbjct:  209 VIVTSKHNNDTQHIWESDSNEFSVI----ADPRGNTLGRGTTITLVLKEEAS-DYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEEPMEEEEAAKEEKEDSDDEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQR 345          
BLAST of CX308827 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.525e-14
Identity = 47/142 (33.10%), Postives = 65/142 (45.77%), Query Frame = -1
Query:   30 VVATKSPRSDKQYVWEAEADSSSYVIREETDPE-KLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTIEV-----------XXXXXXXXXXXXXXXXXXXXXXXXXXKYWDWELANETKPIWMR 419
            V+ T    +D Q++WE++++  S +     DP    L RGT ITL LKE+   ++ E   I+ LVK YSQF++FPIY W  K+ T+E                                        WDWEL N+ KPIW R
Sbjct:  209 VIVTSKHNNDTQHIWESDSNEFSVI----ADPRGNTLGRGTTITLVLKEEAS-DYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEEPAEEEEAAKEDKEESDDEAAVEEEEDEKKPKTKKVEKTVWDWELMNDIKPIWQR 345          
BLAST of CX308827 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.601e-14
Identity = 46/142 (32.39%), Postives = 65/142 (45.77%), Query Frame = -1
Query:   30 VVATKSPRSDKQYVWEAEADSSSYVIREETDPE-KLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTI-----------EVXXXXXXXXXXXXXXXXXXXXXXXXXXKYWDWELANETKPIWMR 419
            V+ T    +D Q++WE++++  S +     DP    L RGT ITL LKE+   ++ E   ++ LVK YSQF++FPIY W  K+ T+           E                             WDWEL N+ KPIW R
Sbjct:  208 VIVTSKHNNDTQHIWESDSNEFSVI----DDPRGNTLGRGTTITLVLKEEAS-DYLELDTVKNLVKKYSQFINFPIYVWSSKTETVEEPVEEEEAKEEKEETDDNEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQR 344          
BLAST of CX308827 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.397e-14
Identity = 46/142 (32.39%), Postives = 65/142 (45.77%), Query Frame = -1
Query:   30 VVATKSPRSDKQYVWEAEADSSSYVIREETDPE-KLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTI-----------EVXXXXXXXXXXXXXXXXXXXXXXXXXXKYWDWELANETKPIWMR 419
            V+ T    +D Q++WE++++  S +     DP    L RGT ITL LKE+   ++ E   I+ LV+ YSQF++FPIY W  K+ T+           E                             WDWEL N+ KPIW R
Sbjct:  209 VIVTSKHNNDTQHIWESDSNEFSVI----ADPRGNTLGRGTTITLVLKEEAS-DYLELDTIKNLVRKYSQFINFPIYVWSSKTETVEEPLEEDETAQEEKEEADDEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQR 345          
BLAST of CX308827 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.397e-14
Identity = 46/142 (32.39%), Postives = 65/142 (45.77%), Query Frame = -1
Query:   30 VVATKSPRSDKQYVWEAEADSSSYVIREETDPE-KLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTI-----------EVXXXXXXXXXXXXXXXXXXXXXXXXXXKYWDWELANETKPIWMR 419
            V+ T    +D Q++WE++++  S +     DP    L RGT ITL LKE+   ++ E   I+ LV+ YSQF++FPIY W  K+ T+           E                             WDWEL N+ KPIW R
Sbjct:  209 VIVTSKHNNDTQHIWESDSNEFSVI----ADPRGNTLGRGTTITLVLKEEAS-DYLELDTIKNLVRKYSQFINFPIYVWSSKTETVEEPLEEDEAAKEEKEESDDEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQR 345          
BLAST of CX308827 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.436e-14
Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = -1
Query:  159 KVVVATKSPRSDKQYVWEAEADSSSYVIREETDPEKLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTIEV 425
            +V+V TK    D+QYVWE++A  S  V  + T  +  L RGT+ITL+LK DD+ E+ E  R++ LVK +S+F+S+PIY W EK+   E+
Sbjct:  145 RVMVTTKH-NDDEQYVWESQAGGSFTVTHDTTGEQ--LGRGTKITLFLK-DDQLEYLEERRLKDLVKKHSEFISYPIYLWTEKTTEKEI 229          
The following BLAST results are available for this feature:
BLAST of CX308827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ENPL_PONAB1.525e-1433.10Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]
ENPL_PIG1.525e-1433.10Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3[more]
ENPL_MACFA1.525e-1433.10Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2... [more]
ENPL_HUMAN1.525e-1433.10Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1[more]
ENPL_CANFA1.525e-1433.10Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]
ENPL_BOVIN1.525e-1433.10Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]
ENPL_CHICK2.601e-1432.39Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
ENPL_RAT3.397e-1432.39Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_MOUSE3.397e-1432.39Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]
HSP82_MAIZE4.436e-1446.07Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionC21004C08Rv AbsLeaSub1 Citrus clementina cDNA clone C21004C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308827 ID=CX308827; Name=CX308827; organism=Citrus clementina; type=EST; length=428bp
TTTTTTTTTTTTTTTTTTTTTTTTGGGTTCCGCATCCATATAGGTTTTGT
TTCATTGGCCAGTTCCCAGTCCCAATACTTCTCAGTTTTAGTTGTTTTCT
TCGTTTTCTTTTCACCCTCCGGCTGTTCTTCCCCTTCTTCTGGTTTTTCC
TCCTCTTCCACCTCAATGGTCCTTGACTTTTCTTGCCAGGTATAGATGGG
GAAAGAAACAAACTGGGAGTAATTCTTCACCAAACCCTGGATTCTTGTTG
GTTCTGAAAATTCGTATTTGTCATCCTCCTTTAAATAAAGTGTGATTTGT
GTTCCACGCTTTAGGAGCTTCTCAGGATCAGTTTCTTCCCTGATCACATA
AGAGCTGCTGTCAGCTTCTGCTTCCCAAACATATTGCTTATCTGACCGTG
GGCTCTTTGTAGCCACTACAACCTTCTG
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