CX308876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308876 vs. ExPASy Swiss-Prot
Match: EIF1_MOUSE (Eukaryotic translation initiation factor 1 OS=Mus musculus GN=Eif1 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.589e-13 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = -3 Query: 1 TFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 180 +FDPFA+A+ D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CN Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN 70
BLAST of CX308876 vs. ExPASy Swiss-Prot
Match: EIF1_HUMAN (Eukaryotic translation initiation factor 1 OS=Homo sapiens GN=EIF1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.589e-13 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = -3 Query: 1 TFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 180 +FDPFA+A+ D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CN Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN 70
BLAST of CX308876 vs. ExPASy Swiss-Prot
Match: EIF1_BOVIN (Eukaryotic translation initiation factor 1 OS=Bos taurus GN=EIF1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.589e-13 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = -3 Query: 1 TFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 180 +FDPFA+A+ D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CN Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN 70
BLAST of CX308876 vs. ExPASy Swiss-Prot
Match: EIF1B_PIG (Eukaryotic translation initiation factor 1b OS=Sus scrofa GN=EIF1B PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.075e-13 Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = -3 Query: 1 TFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 180 +FDPFA+A D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CN Sbjct: 9 SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN 70
BLAST of CX308876 vs. ExPASy Swiss-Prot
Match: EIF1B_MOUSE (Eukaryotic translation initiation factor 1b OS=Mus musculus GN=Eif1b PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.075e-13 Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = -3 Query: 1 TFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 180 +FDPFA+A D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CN Sbjct: 9 SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN 70
BLAST of CX308876 vs. ExPASy Swiss-Prot
Match: EIF1B_MACFA (Eukaryotic translation initiation factor 1b OS=Macaca fascicularis GN=EIF1B PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.075e-13 Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = -3 Query: 1 TFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 180 +FDPFA+A D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CN Sbjct: 9 SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN 70
BLAST of CX308876 vs. ExPASy Swiss-Prot
Match: EIF1B_HUMAN (Eukaryotic translation initiation factor 1b OS=Homo sapiens GN=EIF1B PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.075e-13 Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = -3 Query: 1 TFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 180 +FDPFA+A D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CN Sbjct: 9 SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN 70
BLAST of CX308876 vs. ExPASy Swiss-Prot
Match: SUI1_ASHGO (Protein translation factor SUI1 OS=Ashbya gossypii GN=SUI1A PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.345e-12 Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = -3 Query: 1 TFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 180 +FDPFA+ D A S +Y+HIR+QQRNGRK+LTTVQG+ +E+ +ILK +K+F CN Sbjct: 8 SFDPFADTG--DDEASSSNYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFGCN 65
BLAST of CX308876 vs. ExPASy Swiss-Prot
Match: SUI1_YEAST (Eukaryotic translation initiation factor eIF-1 OS=Saccharomyces cerevisiae GN=SUI1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.294e-12 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = -3 Query: 1 TFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 180 +FDPFA+ D + +Y+HIR+QQRNGRK+LTTVQG+ +E+ +ILK KK+F CN Sbjct: 8 SFDPFADTG--DDETATSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFACN 65
BLAST of CX308876 vs. ExPASy Swiss-Prot
Match: SUI1_SCHPO (Protein translation factor sui1 OS=Schizosaccharomyces pombe GN=sui1 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11 Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = -3 Query: 1 STFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 183 +T DPFA+ +D A + +HIR+QQRNGRK+LTTVQGL +EF +IL+ KK+F CN Sbjct: 8 NTVDPFADTGDDD--AQPLNNIHIRIQQRNGRKTLTTVQGLPREFDQKRILRALKKDFACN 66 The following BLAST results are available for this feature:
BLAST of CX308876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308876 ID=CX308876; Name=CX308876; organism=Citrus clementina; type=EST; length=374bpback to top |