CX308881

Overview
NameCX308881
Unique NameCX308881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig951 contig Ccv1_Contig951:1..459. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 9.382e-35
Identity = 69/153 (45.10%), Postives = 104/153 (67.97%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTR-HKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALGLSIQKARPL 457
            R+  E+DI  L YLQAI KEA R +P++PL++P  + + C ++G+ +P  T+L +N+W + RDP VWE P +F P+RFL R +  ID RG +FEL+PFG+GRR C G    + ++E+ L  L+H F +  PS+   ++M E+ GL++QKA PL
Sbjct:  343 RRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSVWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFVWELPSSVIELNMDESFGLALQKAVPL 495          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.225e-34
Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            K ++ ESD++ + YL+A++KE++RL+   PL +P +S  +  + GY+V + T+++IN W + RD  VWEE   F PERFL     ID RG +FEL+PFGSGRR CPG +FA  + E  LA L+H FDF  P+    E +DM E  G +I K  PL
Sbjct:  348 KGEIEESDLEKMPYLKAVMKESLRLHAPVPLLVPRESTRDTKVLGYDVASGTRVLINCWAIGRDSSVWEESETFLPERFL--ETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVEDLDMSEGSGFTIHKKFPL 500          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.600e-34
Identity = 68/151 (45.03%), Postives = 100/151 (66.23%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQK 445
            K  V E D+  L+Y+++++KE +RL+P +PL +P +  E CTI G+ +P  T++++N   +  DP  WE P +F PERFL     ID +GQ+FE+LPFG GRR CPGV+FA+ V+E  LA LL  FD+  P     + +DM EA+G++I K
Sbjct:  338 KEMVEEIDLSKLLYIKSVVKEVLRLHPPAPLLVPREITENCTIKGFEIPAKTRVLVNAKSIAMDPCCWENPNEFLPERFLV--SPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIGITIHK 486          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.730e-34
Identity = 67/155 (43.23%), Postives = 97/155 (62.58%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            +R + E+D  NL YLQ + KEAMRL+P +PL +PH++     + GY++P  + + +NVW + RDP VW++P +F+PERFL   +D+D++G +F LLPFGSGRR CPG    + +    L  LLH F +  P     E +DMGE  GL      P+
Sbjct:  337 ERVMTEADFSNLPYLQCVTKEAMRLHPPTPLMLPHRANANVKVGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFL--EEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGENPGLVTYMRTPI 489          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.565e-34
Identity = 66/155 (42.58%), Postives = 97/155 (62.58%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVD---MGEALGLSIQKARPL 457
            +R V ESD  NL YL+A +KE +RL+P +PL +P +++E CTI  Y +P   Q+++N W + RDP+ W +P  F PERFL  +  +D RG +F L+PFG+GRR CPG+  A Q +   +A  +   D+  P+   VD   + E  GL++QK  PL
Sbjct:  327 ERSVKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFL--NSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPL 479          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.656e-34
Identity = 67/151 (44.37%), Postives = 104/151 (68.87%), Query Frame = 2
Query:    8 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP-SNEPVDMGEALGLSIQKARPL 457
            ++ E D+  L YL+ ++KE +RL+PA+PL +P +++ +  I GYN+P+ T L++NVW + RDP+ W+ P +F PERF+     ID +G +FE+LPFGSGRR CPG++FA+  +E  L  LL+ FD+  P  ++ +DM EA  ++I K  PL
Sbjct:  342 KIEEDDVDKLQYLKLVVKETLRLHPAAPLLLPRETMSQIKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFI--DCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLPEEDKDLDMEEAGDVTIIKKVPL 490          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 6.081e-34
Identity = 66/155 (42.58%), Postives = 97/155 (62.58%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVD---MGEALGLSIQKARPL 457
            +R V ESD  NL YL+A +KE +RL+P +PL +P +++E CTI  Y +P   Q+++N W + RDP+ W +P  F PERFL  +  +D RG +F L+PFG+GRR CPG+  A Q +   +A  +   D+  P+   VD   + E  GL++QK  PL
Sbjct:  328 ERSVKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFL--NSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPL 480          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.355e-33
Identity = 68/153 (44.44%), Postives = 99/153 (64.71%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTR-HKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPS-NEPVDMGEALGLSIQKARPL 457
            R + ESDI NL YLQAI++E +R++P  PL I  +S +   + GY +P  T+L +NVW + RDP  WE P +F+PERF       +DVRGQ++  +PFGSGRR+CPG S ALQ++   LA ++  F +   + N  VDM E  G+++ +A P+
Sbjct:  337 RIIEESDIVNLPYLQAIVRETLRIHPGGPL-IVRESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNKVDMEEKSGITLPRAHPI 488          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.355e-33
Identity = 69/153 (45.10%), Postives = 99/153 (64.71%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFL-TRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF-ATPSNEPVDMGEALGLSIQKARPL 457
            R V ESDI NL YLQAI++E +RL+P  PL +  +S +   + GY++P  T+L +NVW + RDP  WE+P +F+PERF+      +DVRGQ++  +PFGSGRR CPG S A QV+   LA ++  F +     N  VDM E  G+++ +A P+
Sbjct:  344 RMVEESDIANLPYLQAIVRETLRLHPGGPLVV-RESSKSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGNGKVDMEEKSGITLPRANPI 495          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.355e-33
Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP---SNEPVDMGEALGLSIQKARPL 457
            K ++ E D+  + YL  ILKE  RL+PA P  +P +++    I GY++P  TQ+ +NVW + RDP+ W +P +F PERF   +  +D RGQ+F+LLPFGSGRR CPG+  A+  +E  L  LL+ FD++ P     E +DM EA  +SI K  PL
Sbjct:  342 KERITEEDLGKVEYLNHILKETFRLHPALPFVVPRETMSHIKIQGYDIPPKTQIQLNVWTIGRDPKRWNDPEEFNPERF--ANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMPDGTKGEDIDMEEAGNISIVKKIPL 494          
The following BLAST results are available for this feature:
BLAST of CX308881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
C75A7_EUSGR9.382e-3545.10Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71A6_NEPRA1.225e-3445.81Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71A9_SOYBN1.600e-3445.03Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C98A2_SOYBN2.730e-3443.23Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C80B1_ESCCA3.565e-3442.58(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71BO_ARATH4.656e-3444.37Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C80B2_ESCCA6.081e-3442.58(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C93A2_SOYBN1.355e-3344.44Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C93A1_SOYBN1.355e-3345.10Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71B2_ARATH1.355e-3344.52Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC21004H11Rv AbsLeaSub1 Citrus clementina cDNA clone C21004H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308881 ID=CX308881; Name=CX308881; organism=Citrus clementina; type=EST; length=459bp
GAAAAGGCAAGTGAATGAGTCAGATATAAAGAATTTAGTTTACTTGCAAG
CCATTCTCAAAGAAGCAATGCGTTTGTATCCTGCTTCGCCACTCTCAATT
CCACACAAGTCTATAGAAGAGTGCACGATTAGTGGTTATAATGTCCCTAC
CAGCACACAACTTGTTATCAATGTTTGGAAGCTTCAACGTGATCCACGTG
TCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACAAGGCAC
AAGGATATTGACGTCAGAGGACAAAATTTTGAATTGTTACCTTTTGGTAG
TGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTATGGAAT
TTACACTTGCTGCTTTACTTCATGGCTTTGATTTTGCAACCCCATCAAAT
GAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAAAGCTAG
ACCACTTGA
back to top