CX308881

Overview
NameCX308881
Unique NameCX308881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig951 contig Ccv1_Contig951:1..459. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.818e-31
Identity = 66/155 (42.58%), Postives = 96/155 (61.94%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPL-SIPHKSIEECTIS-GYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRH--KDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSIQKARPL 457
            R V +SDI  L Y+QA++KEA+R++P  PL S    S E+  +  G  VP  T  ++N+W +  DP +WE P +F+PERF+     +++DVRG +  L PFG+GRR CPG +  L  +   +A LLH F++   +  PVD+ E L LS + ARPL
Sbjct:  384 RSVKDSDIPKLPYIQAVVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWLPHAEHPVDLSEVLKLSCEMARPL 538          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.818e-31
Identity = 58/147 (39.46%), Postives = 98/147 (66.67%), Query Frame = 2
Query:   14 NESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP---SNEPVDMGEALGLSIQK 445
            N S  +NL YL++++ E +RL+P +PL +P +  + C I+GY++P  +++++N W + RDPR+W E  +F PERF+ R   I+ +  +FE +PFG+GRR CPG++F L  +E+ LA L++ FD+  P    NE + M E  G+++ +
Sbjct:  339 NGSGTENLKYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIER--SIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVAR 483          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.818e-31
Identity = 59/134 (44.03%), Postives = 88/134 (65.67%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE 403
            K ++ E D+  L Y + ++KE  RL+PA+PL +P +++    I GY++P  TQ++IN + + RDP++W  P +F P+RFL     ID RG NFELLPFGSGRR CPG++  + ++E  L  LL+ FD+  P  E
Sbjct:  338 KERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFL--DSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEKE 469          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 6.293e-31
Identity = 65/155 (41.94%), Postives = 94/155 (60.65%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            K  + E DI+ L YL+ ++KE  R+ P  PL IP ++ ++  I GY++P  T + +N+W + R+P VW++P  F PERF+     ID +G NFE LPFGSGRR CPG+   + ++  TL  LL+ FD+  P     E VD+ E+ GL   K  PL
Sbjct:  334 KDDIIEEDIERLEYLKMVVKETFRVLPLVPLLIPREASKDVKIGGYDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFM--DNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPL 486          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 6.293e-31
Identity = 67/155 (43.23%), Postives = 95/155 (61.29%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSIQKARPL 457
            K  +   DI +L YL+ ++KE  RL+P  PL +P + + E  I+GY +   T L +NVW + RDP  W++   F PERF+    +ID +GQNFELLPFGSGRR CPG+     ++EF LA +L+ FD+  P     E +DM E+ GL++ K   L
Sbjct:  338 KSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFM--DNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVEDIDMEESPGLAVGKKNEL 490          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 6.293e-31
Identity = 61/153 (39.87%), Postives = 99/153 (64.71%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF-ATPSNEPVDMGEALGLSIQKARPL 457
            K ++ E D+  L YL+ ++KE +RL+P +PL +P +++ +  I GY++P  T L++N W + R+P +WE P +F PERF+     +D +G +FE+LPFGSGR+ CPG++F +  +E  L  LL+ FD+     ++ +DM EA   +I K  PL
Sbjct:  343 KERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENPEEFNPERFI--DCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLAEEDKDIDMEEAGDATIVKKVPL 493          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.219e-31
Identity = 67/154 (43.51%), Postives = 94/154 (61.04%), Query Frame = 2
Query:    5 RQVNESDIKNLVYLQAILKEAMRLYPASPL-SIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDID--VRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSIQKARPL 457
            R V E D+  + YL A++KE +RL+P  PL S    SI + TI GY+VP  T  ++N W + RDP VW++P +F PERF+T   D +  + G +  L PFGSGRRACPG +     + F +A+LLH F++     + VD+ E L LS + A PL
Sbjct:  361 RAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVPSDEKGVDLTEVLKLSSEMANPL 514          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.073e-30
Identity = 58/136 (42.65%), Postives = 90/136 (66.18%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPV 409
            K+++ E D+  + Y + ++KE  RL+PA+PL +P +++    I GY++P  TQ++IN++ + RDP++W  P +F P+RFL     ID RG NFELLPFGSGRR CPG++  +  +E  L  LL+ FD+  P  + V
Sbjct:  344 KQRITEQDLSQVHYFKLVVKEIFRLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFL--DSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNV 477          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.073e-30
Identity = 57/131 (43.51%), Postives = 90/131 (68.70%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP 394
            K +V E D+  L YL+ I+KE +RL+P +PL +P +S  +  I GY++P  T++ IN W + RDP+ WE   +F PERF+  +  +D +GQ+F+L+PFG+GRR CPG++F +  +E +LA LL+ F++  P
Sbjct:  341 KAKVEEEDLHQLHYLKLIIKETLRLHPVAPLLVPRESTRDVVIRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFV--NNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELP 469          
BLAST of CX308881 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.402e-30
Identity = 63/156 (40.38%), Postives = 102/156 (65.38%), Query Frame = 2
Query:    2 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF---ATPSNEPVDMGEALGLSIQKARPL 457
            K  V+E +I+N+ YL+A++KEA+RL+P  PL +PH+S ++  +  +++P  TQ++IN W + R+   W  +  +F+PER L     +D RGQ FEL+PFGSGRR CP +SFA+ + E  LA L+H FD+      + +  ++ E+ G++I +  PL
Sbjct:  328 KSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHL--DSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTEDQTEVAESTGIAIHRMFPL 481          
The following BLAST results are available for this feature:
BLAST of CX308881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
C78A4_PINRA4.818e-3142.58Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71D9_SOYBN4.818e-3139.46Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71BS_ARATH4.818e-3144.03Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH6.293e-3141.94Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH6.293e-3143.23Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71B3_ARATH6.293e-3139.87Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C78A3_SOYBN8.219e-3143.51Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C71B7_ARATH1.073e-3042.65Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71A1_PERAE1.073e-3043.51Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71AQ_ARATH1.402e-3040.38Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC21004H11Rv AbsLeaSub1 Citrus clementina cDNA clone C21004H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308881 ID=CX308881; Name=CX308881; organism=Citrus clementina; type=EST; length=459bp
GAAAAGGCAAGTGAATGAGTCAGATATAAAGAATTTAGTTTACTTGCAAG
CCATTCTCAAAGAAGCAATGCGTTTGTATCCTGCTTCGCCACTCTCAATT
CCACACAAGTCTATAGAAGAGTGCACGATTAGTGGTTATAATGTCCCTAC
CAGCACACAACTTGTTATCAATGTTTGGAAGCTTCAACGTGATCCACGTG
TCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACAAGGCAC
AAGGATATTGACGTCAGAGGACAAAATTTTGAATTGTTACCTTTTGGTAG
TGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTATGGAAT
TTACACTTGCTGCTTTACTTCATGGCTTTGATTTTGCAACCCCATCAAAT
GAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAAAGCTAG
ACCACTTGA
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