CX308882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308882 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.499e-31 Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = -1 Query: 1 MSEFDTQIPSTFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 210 MSEFD IP+ FDPFAEANAEDSGAG+KDYVH+RVQQRNGRKSLTTVQGLKK++SYNKILKD KKEFCCN Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCN 70
BLAST of CX308882 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.397e-30 Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = -1 Query: 1 MSEFDTQIPSTFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 210 MSE D+Q+P+ FDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY KILKD KKEFCCN Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCN 70
BLAST of CX308882 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 9.397e-30 Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = -1 Query: 1 MSEFDTQIPSTFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 210 MSE D+Q+P+ FDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY KILKD KKEFCCN Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCN 70
BLAST of CX308882 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.091e-29 Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = -1 Query: 1 MSEFDTQIPSTFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 210 MS+ D QIP+ FDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKD KKEFCCN Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 72
BLAST of CX308882 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.091e-29 Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = -1 Query: 1 MSEFDTQIPSTFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 210 MS+ D QIP+ FDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKD KKEFCCN Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 72
BLAST of CX308882 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.091e-29 Identity = 57/70 (81.43%), Postives = 66/70 (94.29%), Query Frame = -1 Query: 1 MSEFDTQIPSTFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 210 MS+ + Q+P+ FDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY+KILKD KKEFCCN Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCN 70
BLAST of CX308882 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.357e-28 Identity = 60/72 (83.33%), Postives = 65/72 (90.28%), Query Frame = -1 Query: 1 MSEFDTQIPSTFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 210 MS+ D QIP+ FDPF+EANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKD KKEFCCN Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 72
BLAST of CX308882 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.315e-28 Identity = 60/72 (83.33%), Postives = 65/72 (90.28%), Query Frame = -1 Query: 1 MSEFDTQIPSTFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 210 MS+ D QIP+ FDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSY+KILKD KKEFCCN Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCN 72
BLAST of CX308882 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.113e-22 Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = -1 Query: 1 MSEFDTQIPSTFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 210 M + D QIP++FDPFAEA D+ +K+YVHIR+QQRNGRKSLTTVQGLKKE SY+KILKD KK CCN Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCN 70
BLAST of CX308882 vs. ExPASy Swiss-Prot
Match: EIF1_PONAB (Eukaryotic translation initiation factor 1 OS=Pongo abelii GN=EIF1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.610e-13 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = -1 Query: 1 TFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDPKKEFCCN 180 +FDPFA+A+ D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CN Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN 70 The following BLAST results are available for this feature:
BLAST of CX308882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308882 ID=CX308882; Name=CX308882; organism=Citrus clementina; type=EST; length=240bpback to top |