CX308916
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.614e-15 Identity = 39/92 (42.39%), Postives = 59/92 (64.13%), Query Frame = -1 Query: 3 LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNE 278 LF++ S D SIV Y + + + + ++ +FE+W +KH K Y + EK RFEIFKDNL++IDE N +N +Y +GLN FAD++N+ Sbjct: 17 LFVYMGLSFGDFSIVGYSQNDLTST------ERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSND 102
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.771e-13 Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = -1 Query: 3 LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNE 278 LF+ S D SIV Y + + + + ++ +F +W + H K Y + EK RFEIFKDNL +IDE N +N +Y +GLN FADL+N+ Sbjct: 17 LFVHMSVSFGDFSIVGYSQDDLTST------ERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSND 102
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.619e-13 Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = -1 Query: 3 MFLLFLFTVSSALDMSIVSYDKTHESKS-SSWRTDDEVMGMFEAWFVKHGKAY-NALG-EKEKRFEIFKDNLRFIDEHNS---ENRTYKVGLNRFADLTNE 287 + LL + ++A DMSI+SY+ H ++ T+ E ++ W ++G NALG E E+RF +F DNL+F+D HN+ E +++G+NRFADLTNE Sbjct: 11 LLLLIVGAATAAPDMSIISYNAEHGARGLEEGPTEAEARAAYDLWLAENGGGSPNALGGEHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNE 111
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.173e-13 Identity = 30/61 (49.18%), Postives = 46/61 (75.41%), Query Frame = -1 Query: 3 DEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNE 185 + ++ +F++W +KH K Y ++ EK RFEIF+DNL +IDE N +N +Y +GLN FADL+N+ Sbjct: 42 ERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSND 102
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.226e-12 Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = -1 Query: 3 SSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNE 260 +S+ D SIV Y + D+++ +FE W KAY + EK RFE+FKDNL+ IDE N + ++Y +GLN FADL++E Sbjct: 26 ASSHDYSIVGYSP------EDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHE 105
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 5.226e-12 Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = -1 Query: 3 SALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNE 257 S D SIV Y + + + + ++ +F +W +KH K Y + EK RFEIFKDNL++IDE N Y +GLN F+DL+N+ Sbjct: 24 SYCDFSIVGYSQDDLTST------ERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSND 102
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.986e-11 Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 6 MAMFLLFL--FTVSSALD----MSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKH------GKAYNALGEKEKRFEIFKDNLRFIDEHNS---ENRTYKVGLNRFADLTN 293 MA FLL L F +A MSI+ Y+ H + RT+ E ++ W +H G +GE E+RF +F DNL+F+D HN+ E +++G+NRFADLTN Sbjct: 15 MACFLLILAAFAPPAAAAPPDIMSIIRYNAEHGVRGLE-RTEAEARAAYDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTN 124 The following BLAST results are available for this feature:
BLAST of CX308916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308916 ID=CX308916; Name=CX308916; organism=Citrus clementina; type=EST; length=383bpback to top |