CX308941

Overview
NameCX308941
Unique NameCX308941
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length291
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1323 contig Ccv1_Contig1323:297..587. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX308941 vs. ExPASy Swiss-Prot
Match: ATG8_EMENI (Autophagy-related protein 8 OS=Emericella nidulans GN=atg8 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1
Query:    7 KAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 135
            KAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX308941 vs. ExPASy Swiss-Prot
Match: ATG8_COLLN (Autophagy-related protein 8 OS=Colletotrichum lindemuthianum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1
Query:    7 KAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 135
            KAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX308941 vs. ExPASy Swiss-Prot
Match: ATG8_ASPTN (Autophagy-related protein 8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg8 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1
Query:    7 KAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 135
            KAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX308941 vs. ExPASy Swiss-Prot
Match: ATG8_ASPOR (Autophagy-related protein 8 OS=Aspergillus oryzae GN=atg8 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1
Query:    7 KAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 135
            KAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX308941 vs. ExPASy Swiss-Prot
Match: ATG8_ASPNC (Autophagy-related protein 8 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg8 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1
Query:    7 KAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 135
            KAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX308941 vs. ExPASy Swiss-Prot
Match: ATG8_ASPFU (Autophagy-related protein 8 OS=Aspergillus fumigatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1
Query:    7 KAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 135
            KAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX308941 vs. ExPASy Swiss-Prot
Match: ATG8_ASPCL (Autophagy-related protein 8 OS=Aspergillus clavatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1
Query:    7 KAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 135
            KAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX308941 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 37/43 (86.05%), Postives = 41/43 (95.35%), Query Frame = 1
Query:    7 KAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 135
            +AIFIFVD+VLPPT A+MS+IYEE KDEDGFLYVTYSGENTFG
Sbjct:   74 RAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTFG 116          
BLAST of CX308941 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1
Query:    1 AGKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 135
            A KAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:   73 AEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CX308941 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1
Query:    1 AGKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 135
            A KAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:   73 AEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
The following BLAST results are available for this feature:
BLAST of CX308941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
ATG8_EMENI1.338e-1586.05Autophagy-related protein 8 OS=Emericella nidulans... [more]
ATG8_COLLN1.338e-1586.05Autophagy-related protein 8 OS=Colletotrichum lind... [more]
ATG8_ASPTN1.338e-1586.05Autophagy-related protein 8 OS=Aspergillus terreus... [more]
ATG8_ASPOR1.338e-1586.05Autophagy-related protein 8 OS=Aspergillus oryzae ... [more]
ATG8_ASPNC1.338e-1586.05Autophagy-related protein 8 OS=Aspergillus niger (... [more]
ATG8_ASPFU1.338e-1586.05Autophagy-related protein 8 OS=Aspergillus fumigat... [more]
ATG8_ASPCL1.338e-1586.05Autophagy-related protein 8 OS=Aspergillus clavatu... [more]
ATG8_YARLI1.747e-1586.05Autophagy-related protein 8 OS=Yarrowia lipolytica... [more]
ATG8C_ORYSJ1.747e-1584.44Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI1.747e-1584.44Autophagy-related protein 8C OS=Oryza sativa subsp... [more]

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Properties
Property NameValue
Genbank descriptionC21006C02Rv AbsLeaSub1 Citrus clementina cDNA clone C21006C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308941 ID=CX308941; Name=CX308941; organism=Citrus clementina; type=EST; length=291bp
GCGGGAAAGGCGATATTTATTTTTGTGGATAATGTGCTCCCACCTACAGG
TGCAATTATGTCTGCCATATACGAAGAGAAAAAGGATGAAGATGGTTTTC
TTTATGTGACTTACAGTGGGGAGAACACATTTGGAAGCCACATCCCAGTT
TAGCCTTGTGATTATCTATCTGCTCATTGTGTGGTTTCTTGTGCGACCAC
ATTTTTATCTCAATTATCATCCTTGCTTTCCGCTGAATATTCCTTTATCG
GGCATATTTTATATTTTATAAAGACATTGCCAGTGATAATA
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