CX308984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308984 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.504e-11 Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 +L ++P SAG E ++F W A+I+GP ++ Y GG F + FP +YP PP V F ++++HPN+ +G +C+ IL Sbjct: 12 ELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDIL 89
BLAST of CX308984 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 3.351e-11 Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = -2 Query: 58 LVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP-DGKVCISIL 255 LVDE N E I GPPDT YEGG + + P+ YP +PP VRF +++WHPN+ G +C+ IL Sbjct: 31 LVDE-NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL 96
BLAST of CX308984 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 3.351e-11 Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = -2 Query: 58 LVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP-DGKVCISIL 255 LVDE N E I GPPDT YEGG + + P+ YP +PP VRF +++WHPN+ G +C+ IL Sbjct: 31 LVDE-NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL 96
BLAST of CX308984 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 3.351e-11 Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = -2 Query: 58 LVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP-DGKVCISIL 255 LVDE N E I GPPDT YEGG + + P+ YP +PP VRF +++WHPN+ G +C+ IL Sbjct: 31 LVDE-NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL 96
BLAST of CX308984 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L PV G A DESN + I GP D+ +EGG F + P+ YP++ P VRF ++++HPNV G++C+ IL Sbjct: 15 LLAEPVPGIKAE-PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDIL 91
BLAST of CX308984 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11 Identity = 29/78 (37.18%), Postives = 50/78 (64.10%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L + PV G +A + DE+N + + GP D+ +EGG F + P++YP+S P VRF ++++HPN+ G++C+ +L Sbjct: 15 LMQEPVPGINA-IPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVL 91
BLAST of CX308984 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.750e-11 Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = -2 Query: 49 DESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPP 249 +ESN+ + A IIG + YEGG FN + P+ YP PP +RF + ++HPN+ G++C+ IL P Sbjct: 27 NESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLP 93
BLAST of CX308984 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.750e-11 Identity = 30/79 (37.97%), Postives = 50/79 (63.29%), Query Frame = -2 Query: 61 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV-YPDGKVCISI 294 D+ K P SA LVD+ N+ +W A++ GP + +E G F+ + P +YP PPT++FT++++HPN+ DG +C + Sbjct: 13 DMLKTPPSWCSAHLVDD-NLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEV 90
BLAST of CX308984 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.750e-11 Identity = 30/66 (45.45%), Postives = 38/66 (57.58%), Query Frame = -2 Query: 43 NVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGD 240 N+ +I G T +EGG F M F D+YP SPP +F ++HPNVYP G VC+SIL D Sbjct: 37 NLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD 102 The following BLAST results are available for this feature:
BLAST of CX308984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308984 ID=CX308984; Name=CX308984; organism=Citrus clementina; type=EST; length=364bpback to top |