CX308988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_SACD2 (Chorismate synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=aroC PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.470e-24 Identity = 54/76 (71.05%), Postives = 58/76 (76.32%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FG F VTTFGESHG +G IIDGCPP I LSE D+Q+DLDRR+PG SR TT RKE D KI SGV EG TTGTPI Sbjct: 6 FGKLFTVTTFGESHGLALGAIIDGCPPGIELSEEDLQLDLDRRKPGTSRYTTQRKEADQVKILSGVFEGKTTGTPI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_RHOCS (Chorismate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=aroC PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.470e-24 Identity = 51/76 (67.11%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FGT FR TTFGESHG +GCI+DG PPR+PL EA +Q LDRRRPGQSR T R+E D +I SGV EG+TTGTP+ Sbjct: 6 FGTLFRFTTFGESHGPAIGCIVDGVPPRLPLDEAFIQGFLDRRRPGQSRFVTQRQEPDAVRILSGVFEGLTTGTPV 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_ECO7I (Chorismate synthase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=aroC PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.470e-24 Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G FRVTTFGESHG +GCI+DG PP IPL+EAD+Q DLDRRRPG SR TT R+E D KI SG+ EGVTTGT I Sbjct: 7 GQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGIFEGVTTGTSI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_VIBPA (Chorismate synthase OS=Vibrio parahaemolyticus GN=aroC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.532e-24 Identity = 51/75 (68.00%), Postives = 59/75 (78.67%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G +FRVTTFGESHG +GCI+DGCPP + ++EAD+Q DLDRRRPG SR TT R+E D KI SGV EG TTGT I Sbjct: 7 GQHFRVTTFGESHGIALGCIVDGCPPGLEITEADLQTDLDRRRPGTSRYTTQRREPDEVKILSGVFEGKTTGTSI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_VIBHB (Chorismate synthase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=aroC PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 4.532e-24 Identity = 51/75 (68.00%), Postives = 59/75 (78.67%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G +FRVTTFGESHG +GCI+DGCPP + ++EAD+Q DLDRRRPG SR TT R+E D KI SGV EG TTGT I Sbjct: 7 GQHFRVTTFGESHGIALGCIVDGCPPGLEITEADLQTDLDRRRPGTSRYTTQRREPDEVKILSGVFEGQTTGTSI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_SERP5 (Chorismate synthase OS=Serratia proteamaculans (strain 568) GN=aroC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.532e-24 Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G FRVTTFGESHG +GCI+DG PP IPL+EAD+Q DLDRRRPG SR TT R+E D +I SGV EGVTTGT I Sbjct: 7 GQIFRVTTFGESHGVALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVRILSGVFEGVTTGTSI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_PHOLL (Chorismate synthase OS=Photorhabdus luminescens subsp. laumondii GN=aroC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.532e-24 Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G +FRVTTFGESHG +GCI+DG PP I ++EAD+QVDLDRRRPG SR TT R+E D +I SGV EGVTTGT I Sbjct: 7 GQFFRVTTFGESHGLALGCIVDGVPPGIAITEADLQVDLDRRRPGTSRYTTQRREPDQVRILSGVFEGVTTGTSI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_BURCJ (Chorismate synthase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=aroC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.532e-24 Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 GT F VTTFGESHG +GC+IDGCPP + L+EAD+QV+LDRR+PG SR T R+E D +I SGV EGVTTGTPI Sbjct: 7 GTLFTVTTFGESHGPAIGCVIDGCPPGMGLTEADIQVELDRRKPGTSRHVTQRQEADEVEILSGVFEGVTTGTPI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_BURA4 (Chorismate synthase OS=Burkholderia ambifaria (strain MC40-6) GN=aroC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.532e-24 Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 GT F VTTFGESHG +GC+IDGCPP + L+EAD+QV+LDRR+PG SR T R+E D +I SGV EGVTTGTPI Sbjct: 7 GTLFTVTTFGESHGPAIGCVIDGCPPGMGLTEADIQVELDRRKPGTSRHVTQRQEADEVEILSGVFEGVTTGTPI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_SALTY (Chorismate synthase OS=Salmonella typhimurium GN=aroC PE=3 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 5.919e-24 Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G FRVTTFGESHG +GCI+DG PP IPL+EAD+Q DLDRRRPG SR TT R+E D KI SGV +GVTTGT I Sbjct: 7 GQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGVFDGVTTGTSI 81 The following BLAST results are available for this feature:
BLAST of CX308988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 499
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308988 ID=CX308988; Name=CX308988; organism=Citrus clementina; type=EST; length=237bpback to top |