CX309004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309004 vs. ExPASy Swiss-Prot
Match: AROC_SYNP6 (Chorismate synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=aroC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.720e-27 Identity = 53/78 (67.95%), Postives = 65/78 (83.33%), Query Frame = -1 Query: 4 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHV 237 FG FR++TFGESHGGGVG +IDGCPPR+ +SEA++Q +LDRRRPGQS+ITTPRKE D C+I SGV +G T TPI + Sbjct: 5 FGHLFRISTFGESHGGGVGVVIDGCPPRLEISEAEIQFELDRRRPGQSKITTPRKEADQCEILSGVVDGKTLDTPIAI 82
BLAST of CX309004 vs. ExPASy Swiss-Prot
Match: AROC_GRABC (Chorismate synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=aroC PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 6.324e-26 Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FG FRVTT+GESHG +GC++DGCPP IPL+EAD+Q LDRRRPGQSR TT R+E D +I SG EGVTTGTPI Sbjct: 6 FGHLFRVTTWGESHGPAIGCVVDGCPPGIPLTEADIQPALDRRRPGQSRFTTQRREADQVRILSGTFEGVTTGTPI 81
BLAST of CX309004 vs. ExPASy Swiss-Prot
Match: AROC_GLUDA (Chorismate synthase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=aroC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.259e-26 Identity = 53/76 (69.74%), Postives = 62/76 (81.58%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FG FRVTT+GESHG +GC++DGCPPR+PLSEAD+Q LDRRRPGQS+ TT R+E D +I SGV EG TTGTPI Sbjct: 6 FGHLFRVTTWGESHGPAIGCVVDGCPPRLPLSEADIQPWLDRRRPGQSKFTTQRQEPDAVEILSGVFEGQTTGTPI 81
BLAST of CX309004 vs. ExPASy Swiss-Prot
Match: AROC_SYNS3 (Chorismate synthase OS=Synechococcus sp. (strain CC9311) GN=aroC PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.079e-25 Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FG FR++TFGESHGGGVG I+DGCPPR+ L +Q DLDRRRPGQSRITTPRKE D +I SG+ +GVT GTPI Sbjct: 5 FGKLFRISTFGESHGGGVGVIVDGCPPRLKLDLEAIQADLDRRRPGQSRITTPRKEADQVEILSGLLDGVTLGTPI 80
BLAST of CX309004 vs. ExPASy Swiss-Prot
Match: AROC_SYNPW (Chorismate synthase OS=Synechococcus sp. (strain WH7803) GN=aroC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.403e-25 Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FGT FR++TFGESHGGGVG I++GCPPR+ L +Q +LDRRRPGQS+ITTPRKE D +I SGV +G+T GTPI Sbjct: 5 FGTLFRISTFGESHGGGVGVILEGCPPRLELDPLAIQAELDRRRPGQSKITTPRKEADQVEILSGVMDGLTLGTPI 80
BLAST of CX309004 vs. ExPASy Swiss-Prot
Match: AROC_METI4 (Chorismate synthase OS=Methylacidiphilum infernorum (isolate V4) GN=aroC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.403e-25 Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = -1 Query: 1 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHVF 237 FG FR+TT+GESHG GVG +IDGCPPRIPLSE D+Q +LDRRRPGQS+ITT RKE D I SG G+T GTPI ++ Sbjct: 5 FGHLFRITTWGESHGKGVGVVIDGCPPRIPLSEEDIQKELDRRRPGQSKITTQRKERDIAAILSGTFNGMTLGTPIMIW 83
BLAST of CX309004 vs. ExPASy Swiss-Prot
Match: AROC_CELJU (Chorismate synthase OS=Cellvibrio japonicus (strain Ueda107) GN=aroC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.403e-25 Identity = 52/76 (68.42%), Postives = 60/76 (78.95%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 +G F VTTFGESHG +GCI+DGCPP + LSE D+Q+DLDRR+PGQSR TT R+E D KI SGV EG TTGTPI Sbjct: 6 YGKLFTVTTFGESHGAALGCIVDGCPPGLELSEQDIQIDLDRRKPGQSRYTTQRREDDQVKILSGVFEGKTTGTPI 81
BLAST of CX309004 vs. ExPASy Swiss-Prot
Match: AROC_ACICJ (Chorismate synthase OS=Acidiphilium cryptum (strain JF-5) GN=aroC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.403e-25 Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FG FRVTT+GESHG +GC++DG PPRIPLSEAD+Q LDRRRPGQSR TT R+E D +I SGV GVTTGTP+ Sbjct: 6 FGHLFRVTTWGESHGPAIGCVVDGVPPRIPLSEADIQPFLDRRRPGQSRFTTQRREPDIVRILSGVHGGVTTGTPV 81
BLAST of CX309004 vs. ExPASy Swiss-Prot
Match: AROC_RHORT (Chorismate synthase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=aroC PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.139e-25 Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = -1 Query: 4 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHV 237 FGT FR T+FGESHG +GC+++G PP IPL+ AD+Q DLDRR+PGQSR TT R+E D +I SGV EGVTTGTPI V Sbjct: 6 FGTLFRFTSFGESHGPAIGCVVEGVPPGIPLTAADLQHDLDRRKPGQSRFTTQRREDDAAEILSGVYEGVTTGTPIAV 83
BLAST of CX309004 vs. ExPASy Swiss-Prot
Match: AROC_RHOP5 (Chorismate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=aroC PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.139e-25 Identity = 56/82 (68.29%), Postives = 62/82 (75.61%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGV------SEGVTTGTPI 237 FG FRVTTFGESHG +GC++DGCPP IPL+EAD+Q DLDRRRPGQSR TT R+E D KI SGV E VTTGTPI Sbjct: 6 FGHMFRVTTFGESHGVAIGCVVDGCPPLIPLTEADIQGDLDRRRPGQSRFTTQRQEADQVKILSGVMAHPVSGEQVTTGTPI 87 The following BLAST results are available for this feature:
BLAST of CX309004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 499
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309004 ID=CX309004; Name=CX309004; organism=Citrus clementina; type=EST; length=237bpback to top |