CX309021

Overview
NameCX309021
Unique NameCX309021
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length599
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.863e-39
Identity = 81/177 (45.76%), Postives = 111/177 (62.71%), Query Frame = -3
Query:   52 LPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSER----GVVQDAYVLCIVFQKDGPGPRNG----AQYGAPFREE 558
            LPPGFRFHPTD EL+ +YL RK   +      IAE+D+YK+ PW+LP  +    G+ +WYFF PR++KY NG+R NR+   GYWK TG D+P+    + VG+ K LVF+ GKAP+G++T+W+MHEYR+ +   S R     +  D +VLC ++ K G   R G      YG    EE
Sbjct:    7 LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALY--GEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGL-PKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPPPPVVYGDEIMEE 180          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 5.421e-39
Identity = 74/178 (41.57%), Postives = 113/178 (63.48%), Query Frame = -3
Query:   34 LPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLK-WYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRI--DEPGLSERGVVQDAYVLCIVFQKDGPGPRNGAQYGAPFREEDWENDE 558
            +PPGFRFHPTD EL+ YYL++KV  ++   + I ++D+YK  PWDL +   +   +   WYFF  ++KKY  G R NRAT+ G+WK TG+D+ +   + ++GM KTLVF++G+AP G ++DW+MHEYR+  DE G  +    ++ +V+C VF+K     R    Y +      W +D+
Sbjct:    7 VPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQ----EEGWVVCRVFKKRLAAVRRMGDYDS--SPSHWYDDQ 178          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.577e-38
Identity = 82/156 (52.56%), Postives = 108/156 (69.23%), Query Frame = -3
Query:  106 LPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNN--EVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGV---VQDAYVLCIVFQK 558
            LPPGFRFHPTD ELI +YL RKV+   F   AIAEVD+ K  PW LP ++ +  G+ +WYFF  R++KY  G R NRATE GYWK TGKDR +  +    +VGM KTLVF++G+AP+G++++WVMHEYR+ E   S   +    +D +V+  VFQK
Sbjct:   17 LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKM--GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL-EGKFSYHFISRSSKDEWVISRVFQK 169          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.690e-38
Identity = 75/164 (45.73%), Postives = 106/164 (64.63%), Query Frame = -3
Query:  106 LPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPV--QYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERG-----------VVQDAYVLCIVFQK 558
            L PGFRFHPTD EL+ +YLKRKV       E I ++DIYK+ PWDLP      +G+ +WYF+CPR++KY N +R NR T  G+WK TG DRP+     N+ +G+ K+LVF++G+A +G +TDW+MHE+R+  P LSE                D++ +C +F+K
Sbjct:   16 LLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLP--KFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL--PSLSEPSPPSKRFFDSPVSPNDSWAICRIFKK 175          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.690e-38
Identity = 79/167 (47.31%), Postives = 102/167 (61.08%), Query Frame = -3
Query:  100 GKTSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDE----------PGLSERGVVQDAYVLCIVFQKDG 570
            G   LPPGFRFHPTD EL+ YYL RK  G       IAEVD+YK  PWDLP+++    G+ +WYFF PR++KY NG R NRA   GYWK TG D+PV  +   V + K LVF+ GK P+G +T+W+MHEYR+ +             S   +  D +VLC ++ K G
Sbjct:    5 GALQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERA--MGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVG-SPRAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKG 168          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.514e-38
Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = -3
Query:  100 LPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYR---IDEPGLSERGVVQDAYVLCIVFQKDG 558
            LPPGFRFHPTD EL+ +YL R+  G       IAE+D+YK  PW LP  +    G+ +WYFF PR++KY NG+R NRA   GYWK TG D+PV  + + V + K LVF+ GKAP+G++T+W+MHEYR   +D     +  +  D +VLC ++ K G
Sbjct:    9 LPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALY--GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVG-SPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG 161          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.514e-38
Identity = 78/165 (47.27%), Postives = 107/165 (64.85%), Query Frame = -3
Query:  103 SLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPV----QYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEP--------GLSERGVVQDAYVLCIVFQKD 561
            +LPPGFRFHPTD EL+ +YLKRK          IA+VD+YK  PW+LP K+S   G+ +WYFF PR++KY NGAR NRA   GYWK TG D+PV       ++ VG+ K LVF+ GK P+G ++DW+MHEYR+ +         G  +  +  D +VLC +++K+
Sbjct:   16 NLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASF--GEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKN 178          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.589e-38
Identity = 70/135 (51.85%), Postives = 99/135 (73.33%), Query Frame = -3
Query:  154 PGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQY--NNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSE 552
            PGFRFHPTD EL+ +YLKRKV+ +   F+ I +VDIYK+ PWDLP  +++  G+ +WYF+CPR++KY N  R NR T  G+WK TG DRP+    +   +G+ K+LVF+RG+A +G +TDW+MHE+R+  P LS+
Sbjct:   22 PGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAM--GEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRL--PSLSD 152          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.022e-37
Identity = 72/150 (48.00%), Postives = 101/150 (67.33%), Query Frame = -3
Query:  106 PGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGVVQ-DAYVLCIVFQK 552
            PGFRFHPTD EL+ YYL+RKV  +    E I ++DIYK+ PWDLP  SS+  G+ +WYFFC R +KY N  R NR T  G+WK TG D+PV  N + VG+ K+LV++ G A +G +TDW+MHE+R+     ++    Q + + LC +F++
Sbjct:   20 PGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSV--GEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTKTDSPAQQAEVWTLCRIFKR 167          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.975e-37
Identity = 63/135 (46.67%), Postives = 95/135 (70.37%), Query Frame = -3
Query:  169 GKTSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLK-WYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDE 570
            G++ +PPGFRFHPT+ EL+KYYL++K+   K   + I ++D+ K  PWD+ +   + +     WYF+  ++KKY  G R NRAT  G+WK TG+D+ +  N + +GM KTLVF++G+AP G ++DW+MHEYR+DE
Sbjct:    7 GQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDE 141          
The following BLAST results are available for this feature:
BLAST of CX309021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC2_ARATH1.863e-3945.76NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC7_ARATH5.421e-3941.57NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC98_ARATH1.577e-3852.56Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC9_ARATH2.690e-3845.73Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC71_ORYSJ2.690e-3847.31NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC48_ORYSJ3.514e-3848.08NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC18_ARATH3.514e-3847.27NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC94_ARATH4.589e-3851.85Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC42_ARATH1.022e-3748.00NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC66_ARATH2.975e-3746.67NAC domain-containing protein 66 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC21007D11Rv AbsLeaSub1 Citrus clementina cDNA clone C21007D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309021 ID=CX309021; Name=CX309021; organism=Citrus clementina; type=EST; length=599bp
AGCAGAGGAGATAACATCCACACAATCAACATCCTCATCATTTTCCCAGT
CTTCCTCTCTAAATGGTGCTCCATATTGGGCGCCATTCCTAGGGCCTGGA
CCATCCTTCTGAAAAACAATACAGAGCACGTATGCATCCTGAACAACTCC
TCTTTCAGAAAGACCAGGTTCATCAATTCTATACTCATGCATCACCCAGT
CCGTTCGATCACCACGTGGGGCTTTACCCCTGTGAAAAACCAAAGTCTTA
ATCATCCCCACTACTTCATTATTGTATTGAACAGGTCTATCCTTTCCAGT
AGTTTTCCAATAACCAAACTCAGTGGCACGATTCATCCTAGCTCCGTTTG
CATATTTCTTCTCTCGTGGGCAAAAGAAATACCACTTCAGATCCCCACTC
CTCAAACTAGATTTGTCTGGTAAATCCCAAGGAGCGTGCTTGTAAATGTC
AACTTCAGCAATGGCCTCAAATCCAAATTTCCTACCCATTACTTTCCTCT
TCAAATAATACTTGATCAGTTCAACATCGGTTGGATGAAATCGAAACCCC
GGAGGTAGAGACGTTTTTCCCATAGAGAAAATTGGATGGAATATCTCAA
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