CX309021

Overview
NameCX309021
Unique NameCX309021
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length599
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.074e-37
Identity = 77/155 (49.68%), Postives = 103/155 (66.45%), Query Frame = -3
Query:  100 LPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPV--QYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGVVQDAYVLCIVFQKDG 558
            LPPGFRFHPTD ELI +YL  K+         I+EVD+ +  PW+LP+ + +  G+ +WYF+  R++KY  G R NRAT  GYWK TGKD+ V      ++VGM KTLVF++G+APRG +T WVMHEYR+ E   S R   ++ +V+C VF K G
Sbjct:   22 LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKM--GEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRL-ENDHSHRHTCKEEWVICRVFNKTG 173          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 8.655e-37
Identity = 69/169 (40.83%), Postives = 106/169 (62.72%), Query Frame = -3
Query:  106 GKTSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLK-WYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGVV-------------QDAYVLCIVFQK 570
            G++ +PPGFRFHPT+ EL++YYL++KV   +   + I +VD+ K  PWD+ +   + +     WYFF  ++KKY  G R NRAT  G+WK TG+D+ +  N   +GM KTLVF++G+AP G ++DW+MHEYR+D+  +S   V               + +V+C +F+K
Sbjct:   12 GQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKK 180          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.928e-36
Identity = 70/166 (42.17%), Postives = 106/166 (63.86%), Query Frame = -3
Query:  106 GKTSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLK-WYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSE----------RGVVQDAYVLCIVFQK 570
            G++ +PPGFRFHPT+ EL+ YYL++KV  +K   + I EVD+ K  PWD+ ++  + S     WYFF  ++KKY  G R NRAT  G+WK TG+D+ +      +G+ KTLVF++G+AP G ++DW+MHEYR+D+  +S               ++ +V+C VF+K
Sbjct:   12 GQSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRK 177          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.289e-36
Identity = 72/159 (45.28%), Postives = 102/159 (64.15%), Query Frame = -3
Query:  100 SLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLS-----ERGVVQDAYVLCIVFQKDG 561
            +LP GFRFHPTD EL+K+YL R+          IAE+D+YK  PW+LP+ +    G+ +WYFF  R++KY NG+R NRA   GYWK TG D+P+    + +G+ K LVF+ GKAP+G +T+W+MHEYR+     S     +  +  D +VLC ++ K G
Sbjct:   49 NLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALY--GEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKG 204          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.784e-35
Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = -3
Query:   94 SMGKTSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIA-EVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRID---EPGLSERGVVQDAYVLCIVFQKDGPG 576
            SM +  LPPGFRFHP D EL+  YL R+ +        +  +VD+ K  PWD+P  + +   D  WYF+  R++KYA G R NRAT  GYWK TGKDR +    ++VGM KTLVF++G+APRG +TDWVMHE+R+     P        ++ +VLC VF K+  G
Sbjct:   13 SMVEAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGKD--WYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHKNTEG 175          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 8.101e-35
Identity = 79/177 (44.63%), Postives = 104/177 (58.76%), Query Frame = -3
Query:  106 GKTSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPV----------------QYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRI------DEPGLSERGVVQDAYVLCIVFQK 570
            G   LPPGFRFHPTD E+I  YL +K++   F    I EVD+ K  PWDLP K+ +  G+ +WYFF  ++ KY  G R NRAT+ GYWK TGKDR +                    ++VGM KTLVF+ G+AP+G +T+WVMHE+R+        P L  R   +D +V+C VF K
Sbjct:   15 GGLFLPPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKM--GEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLHNHHPNL--RLNPKDEWVVCKVFHK 187          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28
Identity = 70/168 (41.67%), Postives = 94/168 (55.95%), Query Frame = -3
Query:   64 GFRFHPTDVELIKYYLKRKVMGRKFGF-EAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPV---QYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGVVQDAYVLCIVFQK--DGPGPRNGAQYGAP 549
            G+RF+PT  ELI +YLK K++G+ +   EAI+E++I  + P  LP  S ++S D  WYFFCP+E   A      R T  GYWK TG DR +   + N   +G+ KTLV++ G+ P+G  T WVMHEY I      +R      YV+C V  K  DG  P  G     P
Sbjct:    7 GYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHITCLPQDQRN-----YVICQVMYKGEDGDVPSGGNNSSEP 169          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.636e-27
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  175 GFRFHPTDVELIKYYLKRKVMGRKFGF-EAIAEVDIYKHAPW-DLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPV---QYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRI 549
            G+RF PT  E+I +YLK K++G+ +   EAI+E++I  H P  DLP  + ++S DL+WYFF P E    N  +M R T  G+WK TG DR +   + N  V+G+ KTLV+H GK+P G RT WVMHEY I
Sbjct:    7 GYRFSPTGEEVINHYLKNKLLGKYWLVDEAISEINILSHKPSKDLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHI 136          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.446e-23
Identity = 56/133 (42.11%), Postives = 85/133 (63.91%), Query Frame = -3
Query:  169 GFRFHPTDVELIKYYLKRKVMGRKFG--FEAIAEVDIYKHAPWDLPDKSSLRS-GDLK-WYFFCPREKKYANGARMNRATEFGYWKTTGKDRPV-QYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYR-IDE 549
            GFRF+PT+ EL+ +YL+ ++ GR        I  +D+++  P  LP+ + +R  GD + W+FF PR+++ A G R +R T  GYWK TG   PV   +N+++G  KT+VF+ GKAP G +T W M+EY  +DE
Sbjct:    8 GFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDE 140          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.446e-23
Identity = 58/130 (44.62%), Postives = 73/130 (56.15%), Query Frame = -3
Query:  181 PPGFRFHPTDVELIKYYLKRKVMGRKFGF--EAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPV---QYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEY 555
            P GFRF P D E++ +YL+ K +        E I+ VDI    PWDLP KS ++S D  WYFF  +E KY  G +  R T  G+WK TGK   V   + N E +G  + LVF   K   G +TDWVMHEY
Sbjct:    4 PVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVF---KNRDGSKTDWVMHEY 130          
The following BLAST results are available for this feature:
BLAST of CX309021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC31_ARATH5.074e-3749.68Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC43_ARATH8.655e-3740.83NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC12_ARATH1.928e-3642.17NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NA102_ARATH3.289e-3645.28NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC22_ARATH2.784e-3546.06NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC77_ORYSJ8.101e-3544.63NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC69_ARATH5.623e-2841.67NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC68_ARATH1.636e-2748.46NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC90_ARATH5.446e-2342.11NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC4_ARATH5.446e-2344.62NAC domain-containing protein 4 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC21007D11Rv AbsLeaSub1 Citrus clementina cDNA clone C21007D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309021 ID=CX309021; Name=CX309021; organism=Citrus clementina; type=EST; length=599bp
AGCAGAGGAGATAACATCCACACAATCAACATCCTCATCATTTTCCCAGT
CTTCCTCTCTAAATGGTGCTCCATATTGGGCGCCATTCCTAGGGCCTGGA
CCATCCTTCTGAAAAACAATACAGAGCACGTATGCATCCTGAACAACTCC
TCTTTCAGAAAGACCAGGTTCATCAATTCTATACTCATGCATCACCCAGT
CCGTTCGATCACCACGTGGGGCTTTACCCCTGTGAAAAACCAAAGTCTTA
ATCATCCCCACTACTTCATTATTGTATTGAACAGGTCTATCCTTTCCAGT
AGTTTTCCAATAACCAAACTCAGTGGCACGATTCATCCTAGCTCCGTTTG
CATATTTCTTCTCTCGTGGGCAAAAGAAATACCACTTCAGATCCCCACTC
CTCAAACTAGATTTGTCTGGTAAATCCCAAGGAGCGTGCTTGTAAATGTC
AACTTCAGCAATGGCCTCAAATCCAAATTTCCTACCCATTACTTTCCTCT
TCAAATAATACTTGATCAGTTCAACATCGGTTGGATGAAATCGAAACCCC
GGAGGTAGAGACGTTTTTCCCATAGAGAAAATTGGATGGAATATCTCAA
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