CX309022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: AB15C_ARATH (Putative ABC transporter C family member 15 OS=Arabidopsis thaliana GN=ABCC15 PE=5 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.162e-17 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = -3 Query: 2 TILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVG--LETFVKESGISFSVGQRQLICLARALLKSS 292 TI++D ++I + DLR R ++PQ LF+G++R NLDP D +IW L+KC + + + A L+ V E+G ++SVGQRQL+CL R LLK S Sbjct: 843 TIVIDNVDITKIGLHDLRSRLGIIPQDNALFDGTIRLNLDPLAQYTDREIWEALDKCQLGDVIRAKDEKLDATVVENGENWSVGQRQLVCLGRVLLKKS 941
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: MRP9_HUMAN (Multidrug resistance-associated protein 9 OS=Homo sapiens GN=ABCC12 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.130e-17 Identity = 43/99 (43.43%), Postives = 67/99 (67.68%), Query Frame = -3 Query: 2 TILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 292 TI +D ++I + DLR + V+PQ P LF G++R NLDPF + D +W VLE+ +++ + + L+ V E+G +FSVG+RQL+C+ARALL++S Sbjct: 1177 TIFIDEVDICILSLEDLRTKLTVIPQDPVLFVGTVRYNLDPFESHTDEMLWQVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCVARALLRNS 1275
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABCCE_DICDI (ABC transporter C family member 14 OS=Dictyostelium discoideum GN=abcC14 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.130e-17 Identity = 41/98 (41.84%), Postives = 67/98 (68.37%), Query Frame = -3 Query: 5 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEA--VGLETFVKESGIS-FSVGQRQLICLARALLKS 289 IL+DG++I ++ LR +VPQ PF+F G++R N+DPF+ D +IW +EK +K+ + + + LET ++E+G + FS GQ+QL+CL R +LK+ Sbjct: 1129 ILIDGIDISKVQLQKLRSSIGIVPQDPFIFTGTIRSNIDPFNEFTDFEIWESIEKVKLKDAINSMPLKLETALQENGDNGFSYGQKQLLCLCRTILKN 1226
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABCC9_RABIT (ATP-binding cassette transporter sub-family C member 9 OS=Oryctolagus cuniculus GN=ABCC9 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.130e-17 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 289 I++DG++I P+ LR R +++ Q P LF GS+R NLDP D ++W LE +K V+++ GL+ V E G +FSVGQRQL CLARA ++ S Sbjct: 1370 IVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLSGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 1467
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABCC9_HUMAN (ATP-binding cassette transporter sub-family C member 9 OS=Homo sapiens GN=ABCC9 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.130e-17 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 289 I++DG++I P+ LR R +++ Q P LF GS+R NLDP D ++W LE +K V+++ GL+ V E G +FSVGQRQL CLARA ++ S Sbjct: 1370 IVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 1467
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: MDR_LEITA (Multidrug resistance protein OS=Leishmania tarentolae GN=PGPA PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.394e-17 Identity = 43/99 (43.43%), Postives = 67/99 (67.68%), Query Frame = -3 Query: 8 GWTILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEV--EAVGLETFVKESGISFSVGQRQLICLARALLK 298 G I V+G + +RD+R F+++PQ P LF+G++R N+DPF ++W+ LE ++E V E+ G+++ V E G ++SVGQRQL+C+ARALLK Sbjct: 1341 GGVIHVNGREMSAYGLRDVRRHFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLK 1439
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABCC9_RAT (ATP-binding cassette transporter sub-family C member 9 OS=Rattus norvegicus GN=Abcc9 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.394e-17 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 289 I++DG++I P+ LR R +++ Q P LF GS+R NLDP D ++W LE +K V+++ GL+ V E G +FSVGQRQL CLARA ++ S Sbjct: 1366 IVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKS 1463
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABCC9_MOUSE (ATP-binding cassette transporter sub-family C member 9 OS=Mus musculus GN=Abcc9 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.394e-17 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 289 I++DG++I P+ LR R +++ Q P LF GS+R NLDP D ++W LE +K V+++ GL+ V E G +FSVGQRQL CLARA ++ S Sbjct: 1367 IVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKS 1464
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABCC6_DICDI (ABC transporter C family member 6 OS=Dictyostelium discoideum GN=abcC6 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.394e-17 Identity = 41/98 (41.84%), Postives = 67/98 (68.37%), Query Frame = -3 Query: 5 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEA--VGLETFVKESGIS-FSVGQRQLICLARALLKS 289 IL+DG++I ++ LR +VPQ PF+F G++R N+DPF+ D +IW +EK +K+ + + + LET ++E+G + FS GQ+QL+CL R +LK+ Sbjct: 1159 ILIDGIDISKVQLQKLRSSIGIVPQDPFIFTGTIRSNIDPFNEFTDFEIWESVEKVKLKDAINSMPLKLETALQENGDNGFSYGQKQLLCLCRTILKN 1256
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: YH85_SCHPO (Uncharacterized ABC transporter ATP-binding protein/permease C359.05 OS=Schizosaccharomyces pombe GN=SPBC359.05 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 289 I +D +I + DLR R +++PQ +FEG++R+NLDP H D KIW VLE +K + + GL + V E G +FS GQRQLICLAR LL S+ Sbjct: 1284 IEIDNEDITKFGLYDLRSRLSIIPQESQIFEGNIRENLDPNHRLTDKKIWEVLEIASLKNCISQLEDGLYSRVAEGGANFSSGQRQLICLARVLLTST 1381 The following BLAST results are available for this feature:
BLAST of CX309022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309022 ID=CX309022; Name=CX309022; organism=Citrus clementina; type=EST; length=300bpback to top |