CX309022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = -3 Query: 8 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQRQLICLARALLK 289 IL+DG++I ++DLR + +++PQ P LF G +R NLDP + D +IW LEKC +K + + + + V + G ++SVGQRQL CL R LLK Sbjct: 1103 ILIDGIDISKIGLKDLRMKLSIIPQEPTLFRGCIRTNLDPLGVYSDDEIWKALEKCQLKTTISNLPNKLDSSEVSDEGENWSVGQRQLFCLGRVLLK 1199
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: AB12C_ARATH (ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 41/98 (41.84%), Postives = 64/98 (65.31%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEV--EAVGLETFVKESGISFSVGQRQLICLARALLKSS 289 I++D ++ + D+R +++PQSP LF G++R N+DPF ++D +W L + H+K+ + GL+ V E G +FSVGQRQL+ LARALL+ S Sbjct: 1293 IMIDDCDVAKFGLTDVRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDAGLWEALHRAHIKDVISRNPFGLDAEVCEGGENFSVGQRQLLSLARALLRRS 1390
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: MRP9_MOUSE (Multidrug resistance-associated protein 9 OS=Mus musculus GN=Abcc12 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.050e-16 Identity = 41/99 (41.41%), Postives = 67/99 (67.68%), Query Frame = -3 Query: 2 TILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 292 TI++D ++I + DLR + ++PQ P LF G++R NLDP + D +W VLE+ +++ + + L+ V E+G +FSVG+RQL+C+ARALL++S Sbjct: 1184 TIIIDEVDICTVGLEDLRTKLTMIPQDPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLRNS 1282
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.677e-16 Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEA--VGLETFVKESGISFSVGQRQLICLARALLKSS 289 I +D ++I + DLR R ++PQ P LFEG++R NLDP + D KIW L+K + + V + L++ V E+G ++SVGQRQL+ L RALLK + Sbjct: 1326 ITIDNIDISQIGLHDLRSRLGIIPQDPTLFEGTIRANLDPLEEHSDDKIWEALDKSQLGDVVRGKDLKLDSPVLENGDNWSVGQRQLVSLGRALLKQA 1423
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABCC8_HUMAN (ATP-binding cassette transporter sub-family C member 8 OS=Homo sapiens GN=ABCC8 PE=1 SV=5) HSP 1 Score: 83.5741 bits (205), Expect = 3.496e-16 Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 289 I++DG++I P+ LR R +++ Q P LF G++R NLDP D +W LE +K V+A+ GL+ + E G +FS GQRQL CLARA ++ + Sbjct: 1402 IIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPERKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKT 1499
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABCC8_RAT (ATP-binding cassette transporter sub-family C member 8 OS=Rattus norvegicus GN=Abcc8 PE=1 SV=4) HSP 1 Score: 83.1889 bits (204), Expect = 4.566e-16 Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 289 I++DG++I P+ LR R +++ Q P LF G++R NLDP D +W LE +K V+A+ GL+ + E G +FS GQRQL CLARA ++ + Sbjct: 1403 IIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKT 1500
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABCC8_CRICR (ATP-binding cassette transporter sub-family C member 8 OS=Cricetus cricetus GN=ABCC8 PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.566e-16 Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 289 I++DG++I P+ LR R +++ Q P LF G++R NLDP D +W LE +K V+A+ GL+ + E G +FS GQRQL CLARA ++ + Sbjct: 1403 IIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKT 1500
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: YCFI_YEAST (Metal resistance protein YCF1 OS=Saccharomyces cerevisiae GN=YCF1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.789e-16 Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV---GLETFVKESGISFSVGQRQLICLARALLKSS 289 I++D + I + DLR + +++PQ +FEG++R+N+DP + D IW LE H+KE V ++ GL+ + E G + SVGQRQL+CLARA+L S Sbjct: 1330 IVIDNIAINEIGLYDLRHKLSIIPQDSQVFEGTVRENIDPINQYTDEAIWRALELSHLKEHVLSMSNDGLDAQLTEGGGNLSVGQRQLLCLARAMLVPS 1428
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: MRP9_RAT (Multidrug resistance-associated protein 9 OS=Rattus norvegicus GN=Abcc12 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15 Identity = 40/99 (40.40%), Postives = 66/99 (66.67%), Query Frame = -3 Query: 2 TILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 292 TI +D ++I + +LR + ++PQ P LF G++R NLDP + D +W VLE+ +++ + + L+ V E+G +FSVG+RQL+C+ARALL++S Sbjct: 1184 TIFIDEVDICTVGLEELRTKLTMIPQDPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLRNS 1282
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABC2_SCHPO (ATP-binding cassette transporter abc2 OS=Schizosaccharomyces pombe GN=abc2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.049e-15 Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = -3 Query: 11 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALL 289 I +D +NI + + DLR R A++PQ FEG++R+NLDP D +IW LE +K+ ++ + GL + V E G + S GQRQL+CL RALL Sbjct: 1297 IQLDDINITSIGLHDLRSRLAIIPQENQAFEGTIRENLDPNANATDEEIWHALEAASLKQFIQTLDGGLYSRVTEGGANLSSGQRQLMCLTRALL 1391 The following BLAST results are available for this feature:
BLAST of CX309022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309022 ID=CX309022; Name=CX309022; organism=Citrus clementina; type=EST; length=300bpback to top |