CX309032

Overview
NameCX309032
Unique NameCX309032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length462
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 5.032e-31
Identity = 63/153 (41.18%), Postives = 103/153 (67.32%), Query Frame = -1
Query:    4 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSVQKARPL 459
            K  V+E DI+ + YL+A++KEA+RL+P  PL +PH+S ++  +   ++P  TQ+++N+W + R+   W  +  + +PER L      D RGQ+FEL+PFG+GRR CPG+SFA+ + E  LA L+HGFD+ +  +E  D+ E++G  +++  PL
Sbjct:  326 KSSVSEDDIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPERHL--ESPSDFRGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDDE-TDVAESIGSVIRRMHPL 475          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 6.573e-31
Identity = 62/154 (40.26%), Postives = 101/154 (65.58%), Query Frame = -1
Query:    1 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN-EPVDMGEALGLSVQKARPLE 459
            K ++ E D+  L YL+ ++KE +RL+PA+PL +P +++ +  I GY++P  T L+++ W L RDP+ W+ P +  PERF+     +D +G +FE LPFGSGRR CPG++ A+  +E TL  LL+ FD+  P   + ++M E+  +++ K  PLE
Sbjct:  343 KERIEEEDVGKLQYLKLVIKETLRLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFI--DCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEMKDMNMEESGDVTIVKKVPLE 494          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 8.584e-31
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = -1
Query:   76 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKD----IDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF 456
            R V ESD  NL YLQAILKE  RL+P  P+ +  + + ECT+  Y +P  + L +NVW + R+P+ W+ P + +PERFL    D    +DVRG +F+LLPFGSGRR CPGVS A+Q +   L A++  FDF
Sbjct:  342 RLVEESDCPNLPYLQAILKETFRLHPPVPM-VTRRCVAECTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCFDF 471          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.584e-31
Identity = 68/153 (44.44%), Postives = 99/153 (64.71%), Query Frame = -1
Query:   10 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP---SNEPVDMGEALGLSVQKAR 459
            K  V+ S+++ L YL+++LKE +RL+P  PL IP +S EEC ++GY +P  T++ INVW + RDP+ WE+P   +PERF    +D    G +FE +PFG+GRR CPG+ F L  +E  LA LL+ FD+  P   ++  +DM E  GLS  K +
Sbjct:  335 KTVVDLSEVQELKYLRSVLKETLRLHPPFPL-IPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDF--MGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKKK 484          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.584e-31
Identity = 68/153 (44.44%), Postives = 99/153 (64.71%), Query Frame = -1
Query:   10 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP---SNEPVDMGEALGLSVQKAR 459
            K  V+ S+++ L YL+++LKE +RL+P  PL IP +S EEC ++GY +P  T++ INVW + RDP+ WE+P   +PERF    +D    G +FE +PFG+GRR CPG+ F L  +E  LA LL+ FD+  P   ++  +DM E  GLS  K +
Sbjct:  335 KTVVDLSEVQELKYLRSVLKETLRLHPPFPL-IPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDF--MGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKKK 484          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.121e-30
Identity = 59/158 (37.34%), Postives = 100/158 (63.29%), Query Frame = -1
Query:    4 RQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKD--IDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP-----SNEPVDMGEALGLSVQKARPL 456
            R V E D+  + YL+A +KE+MR++P +P  +PH S  +C I+GY +P  T++++N W L RDP  W++  +  PERFL + +D  +D+ G++   +PFG+GRR C G +FA+  +E  LA L++ FD+  P     +   VDM +  G+++++ + L
Sbjct:  365 RMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKL 522          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.121e-30
Identity = 64/155 (41.29%), Postives = 97/155 (62.58%), Query Frame = -1
Query:    4 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPL 459
            +  ++  D+  L YL+ ++KE  RL+P +PL +P +++ E  I+GY +P  T+L +NVW + RDP  W++P    PERF+    +ID +GQ+FELLPFG GRR CP +     ++EF LA LL+ FD+  P     + +D+ EA GL+V K   L
Sbjct:  337 RSMISFEDMDQLEYLKMVIKETWRLHPTTPLLLPREAMSEFDINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFM--DNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVKDIDVEEAPGLTVNKKNEL 489          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.121e-30
Identity = 65/156 (41.67%), Postives = 94/156 (60.26%), Query Frame = -1
Query:    1 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPLE 459
            K  + E DI+ L YL+ ++KE  R+ P  PL IP ++ ++  I GYN+P  T + +N+W + R+P VW++P    PERF+     ID +G NFELLPFGSGRR CPG+   + ++  TL  LL+ FD+  P       VD+ E+ GL   K  PL+
Sbjct:  334 KDDIIEEDIERLQYLKMVIKETFRINPLVPLLIPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFM--DSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQ 487          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 1.912e-30
Identity = 60/154 (38.96%), Postives = 99/154 (64.29%), Query Frame = -1
Query:    1 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF-ATPSNEPVDMGEALGLSVQKARPLE 459
            K ++ E D+  L YL+ ++KE +RL+P +PL +P +++ +  I GY++P  T L++N W + R+P +WE P +  PERF+     +D +G +FE+LPFGSGR+ CPG++F +  +E  L  LL+ FD+     ++ +DM EA   ++ K  PLE
Sbjct:  343 KERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENPEEFNPERFI--DCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLAEEDKDIDMEEAGDATIVKKVPLE 494          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 2.498e-30
Identity = 62/155 (40.00%), Postives = 100/155 (64.52%), Query Frame = -1
Query:    4 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPL 459
            K ++ E D++ + YL+ ++ E  RL+P +PL +P  ++ +  I GYN+P +T + IN + + RDP+ W++P +  PERFL     ID +GQ+FELLPFG+GRR CPG++  + ++E  L  LL+ FD++ P+    E +DM E  G ++ K  PL
Sbjct:  339 KERITEEDLEKVEYLKLVMVETFRLHPPAPLLLPRLTMSDIKIQGYNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERFL--DSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEGFAIAKKVPL 491          
The following BLAST results are available for this feature:
BLAST of CX309032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 361
Match NameE-valueIdentityDescription
C71AN_ARATH5.032e-3141.18Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71BP_ARATH6.573e-3140.26Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C93B1_GLYEC8.584e-3148.85Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71DI_MENSP8.584e-3144.44Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR8.584e-3144.44Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71C1_MAIZE1.121e-3037.34Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71BW_ARATH1.121e-3041.29Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH1.121e-3041.67Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71B3_ARATH1.912e-3038.96Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BZ_ARATH2.498e-3040.00Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC21007E12Rv AbsLeaSub1 Citrus clementina cDNA clone C21007E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309032 ID=CX309032; Name=CX309032; organism=Citrus clementina; type=EST; length=462bp
TTCAAGTGGTCTAGCTTTCTGGACACTCAACCCTAGTGCCTCTCCCATGT
CCACCGGTTCATTTGATGGGGTTGCAAAATCAAAGCCATGAAGTAAAGCA
GCAAGTGTAAATTCCATAACTTGGAGGGCAAATGAAACTCCAGGACAAGC
TCTTCTACCACTACCAAAAGGTAACAATTCAAAATTTTGTCCTCTGACAT
CAATATCCTTGTGCCTTGTCAAAAATCTTTCTGGCTGAGACTTACAAGGC
TCTTCCCAGACACGTGGATCACGTTGAAGCTTCCAAACATTGATAACAAG
TTGTGTGCTGGTAGGGACATTATAACCACTAATCGTGCACTCTTCTATAG
ACTTGTGTGGAATTGAGAGTGGCGAAGCAGGATACAAACGCATTGCTTCT
TTGAGAATGGCTTGCAAGTAAACTAAATTCTTTATATCTGACTCATTCAC
TTGCCTTTTCGT
back to top