CX309032

Overview
NameCX309032
Unique NameCX309032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length462
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.262e-30
Identity = 63/156 (40.38%), Postives = 95/156 (60.90%), Query Frame = -1
Query:    4 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPL 459
            K  V+E DI NL YL+A++KE++RL P  P+ +  ++I +  I GY++P  T + +N W + RD   W + P +  PERF+  HK +D +GQ+FELLPFGSGRR CP +   + ++E   A LL+ FD++ P     E + M    GL++ K   L
Sbjct:  336 KGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHL 491          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.262e-30
Identity = 58/147 (39.46%), Postives = 97/147 (65.99%), Query Frame = -1
Query:   16 NESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP---SNEPVDMGEALGLSVQK 447
            N S  +NL YL++++ E +RL+P +PL +P +  + C I+GY++P  +++++N W + RDPR+W E  +  PERF+ R   I+ +  +FE +PFG+GRR CPG++F L  +E+ LA L++ FD+  P    NE + M E  G++V +
Sbjct:  339 NGSGTENLKYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIER--SIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVAR 483          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.262e-30
Identity = 64/156 (41.03%), Postives = 94/156 (60.26%), Query Frame = -1
Query:    1 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPLE 459
            K  + E DI+ L YL+ ++KE  R+ P  PL IP ++ ++  I GY++P  T + +N+W + R+P VW++P    PERF+     ID +G NFE LPFGSGRR CPG+   + ++  TL  LL+ FD+  P     E VD+ E+ GL   K  PL+
Sbjct:  334 KDDIIEEDIERLEYLKMVVKETFRVLPLVPLLIPREASKDVKIGGYDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFM--DNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLQ 487          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.260e-30
Identity = 65/155 (41.94%), Postives = 95/155 (61.29%), Query Frame = -1
Query:    4 RQVNESDIKNLVYLQAILKEAMRLYPASPL-SIPHKSIEECTIS-GYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRH--KDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSVQKARPL 456
            R V +SDI  L Y+QA++KEA+R++P  PL S    S E+  +  G  VP  T  ++N+W +  DP +WE P + +PERF+     +++DVRG +  L PFG+GRR CPG +  L  +   +A LLH F++   +  PVD+ E L LS + ARPL
Sbjct:  384 RSVKDSDIPKLPYIQAVVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWLPHAEHPVDLSEVLKLSCEMARPL 538          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.260e-30
Identity = 58/134 (43.28%), Postives = 87/134 (64.93%), Query Frame = -1
Query:   58 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE 459
            K ++ E D+  L Y + ++KE  RL+PA+PL +P +++    I GY++P  TQ++IN + + RDP++W  P +  P+RFL     ID RG NFELLPFGSGRR CPG++  + ++E  L  LL+ FD+  P  E
Sbjct:  338 KERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFL--DSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEKE 469          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 4.260e-30
Identity = 67/155 (43.23%), Postives = 94/155 (60.65%), Query Frame = -1
Query:    4 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPL 459
            K  +   DI +L YL+ ++KE  RL+P  PL +P + + E  I+GY +   T L +NVW + RDP  W++     PERF+    +ID +GQNFELLPFGSGRR CPG+     ++EF LA +L+ FD+  P     E +DM E+ GL+V K   L
Sbjct:  338 KSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFM--DNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVEDIDMEESPGLAVGKKNEL 490          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.564e-30
Identity = 60/156 (38.46%), Postives = 98/156 (62.82%), Query Frame = -1
Query:    1 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPLE 459
            K ++ E D++ + YL+ +++E  RL+P +PL +P +++ +  I GYN+P +T + IN + + RDP  WE P    PERF+     ++ +GQ++ELLPFG+GRR CPG++  + ++E  L  +L+ FD++ P     E +DM EA    V K  PLE
Sbjct:  339 KEKITEQDLEKVHYLKLVIEETFRLHPPAPLLLPRETMSDLKIQGYNIPKNTMIEINTYSIGRDPNCWENPNDFNPERFI--DSPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSLPDGMKIEDIDMEEAGAFVVAKKVPLE 492          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.564e-30
Identity = 60/156 (38.46%), Postives = 98/156 (62.82%), Query Frame = -1
Query:    1 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATP---SNEPVDMGEALGLSVQKARPLE 459
            K+++ E D+  + Y + ++KE  RL+PA+PL +P +++    I GY++P  TQ++IN++ + RDP++W  P +  P+RFL     ID RG NFELLPFGSGRR CPG++  +  +E  L  LL+ FD+  P   + + +++ E   + + K   LE
Sbjct:  344 KQRITEQDLSQVHYFKLVVKEIFRLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFL--DSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLE 497          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 7.267e-30
Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = -1
Query:    4 RQVNESDIKNLVYLQAILKEAMRLYPASPL-SIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDID--VRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNEPVDMGEALGLSVQKARPL 456
            R V E D+  + YL A++KE +RL+P  PL S    SI + TI GY+VP  T  ++N W + RDP VW++P +  PERF+T   D +  + G +  L PFGSGRRACPG +     + F +A+LLH F++     + VD+ E L LS + A PL
Sbjct:  361 RAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVPSDEKGVDLTEVLKLSSEMANPL 514          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 9.491e-30
Identity = 61/154 (39.61%), Postives = 97/154 (62.99%), Query Frame = -1
Query:    1 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPLE 453
            ++ E D+  L Y + ++KE  RL+PA+PL +P +++ +  I GY++P  TQ+++NV+ + RDP +WE P + +PERF+     +D RG NFELLPFGSGRR CPG++  +  +E  L  LL+ FD+  P     + +D+ E   + + K   LE
Sbjct:  343 RITEQDLNQLNYFKLVIKETFRLHPAAPLLLPREAMAKIKIQGYDIPEKTQIMVNVYAIGRDPDLWENPEEFKPERFV--DSSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGLPEGRTVKDIDLEEEGAIIIGKKVSLE 494          
The following BLAST results are available for this feature:
BLAST of CX309032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 361
Match NameE-valueIdentityDescription
C83B1_ARATH3.262e-3040.38Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71D9_SOYBN3.262e-3039.46Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71BB_ARATH3.262e-3041.03Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C78A4_PINRA4.260e-3041.94Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71BS_ARATH4.260e-3043.28Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH4.260e-3043.23Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71BM_ARATH5.564e-3038.46Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH5.564e-3038.46Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C78A3_SOYBN7.267e-3042.86Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C71BN_ARATH9.491e-3039.61Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC21007E12Rv AbsLeaSub1 Citrus clementina cDNA clone C21007E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309032 ID=CX309032; Name=CX309032; organism=Citrus clementina; type=EST; length=462bp
TTCAAGTGGTCTAGCTTTCTGGACACTCAACCCTAGTGCCTCTCCCATGT
CCACCGGTTCATTTGATGGGGTTGCAAAATCAAAGCCATGAAGTAAAGCA
GCAAGTGTAAATTCCATAACTTGGAGGGCAAATGAAACTCCAGGACAAGC
TCTTCTACCACTACCAAAAGGTAACAATTCAAAATTTTGTCCTCTGACAT
CAATATCCTTGTGCCTTGTCAAAAATCTTTCTGGCTGAGACTTACAAGGC
TCTTCCCAGACACGTGGATCACGTTGAAGCTTCCAAACATTGATAACAAG
TTGTGTGCTGGTAGGGACATTATAACCACTAATCGTGCACTCTTCTATAG
ACTTGTGTGGAATTGAGAGTGGCGAAGCAGGATACAAACGCATTGCTTCT
TTGAGAATGGCTTGCAAGTAAACTAAATTCTTTATATCTGACTCATTCAC
TTGCCTTTTCGT
back to top