CX309046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.596e-17 Identity = 38/83 (45.78%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TD+ RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI FV S D IL ++ + I E+P + Sbjct: 323 GDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS-DDIKILRDIEQYYSTQIDEMPMNV 404
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.596e-17 Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VINYD+P + Y HR+GR+GRFG KG+AI FV + D +L +Q + V I+ELP + Sbjct: 329 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYQHRIGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANV 410
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DHH1_DEBHA (ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii GN=DHH1 PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.596e-17 Identity = 44/89 (49.44%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 273 G R+LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI + S +D L +++ +IK +P ID S Y+ Sbjct: 316 GKVRVLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLM-SWNDRYNLYKIEQELGTEIKPIPATIDKSLYV 403
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17 Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI V+ D +L +Q + V I+ELP + Sbjct: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINSVTK-DDERMLFDIQKFYNVVIEELPANV 409
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17 Identity = 39/83 (46.99%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VINYD+P + YLHR+G +GRFG KG++I FV+ D +L +Q + V I+ELP + Sbjct: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGHSGRFGRKGVSINFVTK-DDERMLFDIQKFYNVVIEELPANV 409
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: FAL1_SCHPO (ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe GN=tif412 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17 Identity = 39/83 (46.99%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 GN R+L+ TD+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV++ D IL ++ + I E+P I Sbjct: 309 GNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTN-EDVRILRDIEQYYSTVIDEMPMNI 390
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_DICDI (Eukaryotic initiation factor 4A OS=Dictyostelium discoideum GN=tifA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.723e-17 Identity = 38/80 (47.50%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 246 G R+L+ TD++ RGID+++V++VINYD+P + Y+HR+GR+GRFG KG+AI FV + SD IL ++ + I E+P Sbjct: 320 GENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKN-SDIRILRDIEQFYSTQIDEMP 398
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.723e-17 Identity = 38/83 (45.78%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ RIL++TDL+ RGID+++V++VINYD+P++ + Y+HR+GR GRFG KG+AI V+ D + +++ + I+ELP I Sbjct: 310 GSSRILISTDLLARGIDVQQVSLVINYDLPNNKENYIHRIGRGGRFGRKGVAINLVTDRDVGD-MRELERFYSTQIEELPANI 391
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.723e-17 Identity = 36/85 (42.35%), Postives = 63/85 (74.12%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 261 G+ R+L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++S SD + +++ + + I +P + T Sbjct: 314 GHSRVLISTDVWARGIDVQQVSLVINYDIPEIMENYIHRIGRSGRFGRKGVAINFITS-SDLSKMKEIEKYYRIKISPVPADLST 397
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.723e-17 Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 273 G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI + + +D L +++ +I +P QID S Y+ Sbjct: 322 GKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI-NWNDRFNLYKIEQELNTEIAPIPSQIDKSLYV 409 The following BLAST results are available for this feature:
BLAST of CX309046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 482
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309046 ID=CX309046; Name=CX309046; organism=Citrus clementina; type=EST; length=485bpback to top |